RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 GNAO1P09471 354 aa12.42□□□□□ -0.42
PPP4R3A-206ENST00000554943 JUNBP17275 347 aaPredicted RBP12.42□□□□□ -0.42
PPP4R3A-206ENST00000554943 NME5P56597 212 aa12.42□□□□□ -0.42
PPP4R3A-206ENST00000554943 RNF219Q5W0B1 726 aaPredicted RBP12.42□□□□□ -0.42
PPP4R3A-206ENST00000554943 TMC8Q8IU68 726 aa12.42□□□□□ -0.42
PPP4R3A-206ENST00000554943 TCEAL8Q8IYN2 117 aa12.42□□□□□ -0.42
PPP4R3A-206ENST00000554943 BBS5Q8N3I7 341 aa12.42□□□□□ -0.42
PPP4R3A-206ENST00000554943 CLMPQ9H6B4 373 aa12.42□□□□□ -0.42
PPP4R3A-206ENST00000554943 INTS7Q9NVH2 962 aaKnown RBP12.42□□□□□ -0.42
PPP4R3A-206ENST00000554943 SMPD4Q9NXE4 827 aa12.42□□□□□ -0.42
PPP4R3A-206ENST00000554943 TRPS1Q9UHF7 1281 aa12.42□□□□□ -0.42
PPP4R3A-206ENST00000554943 FAM50BQ9Y247 325 aa12.42□□□□□ -0.42
PPP4R3A-206ENST00000554943 CLGNO14967 610 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 GPC4O75487 556 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 TRBC1P01850 177 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 RHOCP08134 193 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 CKMT2P17540 419 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 MERTKQ12866 999 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 CAPRIN1Q14444 709 aaKnown RBP12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 RABL3Q5HYI8 236 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 CAMK1DQ8IU85 385 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 EME1Q96AY2 570 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 RHBDF1Q96CC6 855 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 FAM193BQ96PV7 902 aaPredicted RBP12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 OCEL1Q9H607 264 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 SERHLQ9NQF3 203 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 ZNHIT2Q9UHR6 403 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 EIF2B4Q9UI10 523 aaKnown RBP12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 VPS51Q9UID3 782 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 TIMM22Q9Y584 194 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 SUPT3HB4E1H0 165 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 BTN3A1O00481 513 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 SUPT3HO75486 399 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 CSPG5O95196 566 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 SOD2P04179 222 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 CTSAP10619 480 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 HSPA8P11142 646 aaKnown RBP12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 FCGR1AP12314 374 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 ACVR2AP27037 513 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 HTR6P50406 440 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 POLE2P56282 527 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 STX1BP61266 288 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 B4GALNT1Q00973 533 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 LIPEQ05469 1076 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 SELPLGQ14242 412 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 C1orf53Q5VUE5 145 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 TBPL2Q6SJ96 375 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 CYP2R1Q6VVX0 501 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 HTR3DQ70Z44 454 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 AMIGO2Q86SJ2 522 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 GPSM1Q86YR5 675 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 CPNE9Q8IYJ1 553 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 TSPAN14Q8NG11 270 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 HGH1Q9BTY7 390 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 TRIM15Q9C019 465 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 IL26Q9NPH9 171 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 GKN1Q9NS71 199 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 SLC25A37Q9NYZ2 338 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 USE1Q9NZ43 259 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 TNPO3Q9Y5L0 923 aaKnown RBP12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 SNAP91O60641 907 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 HPRP00739 348 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 INHBBP09529 407 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 SCNN1BP51168 640 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 GRSF1Q12849 480 aaKnown RBP eCLIP12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 NFATC2Q13469 925 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 NRF1Q16656 503 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 TMTC4Q5T4D3 741 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 TBC1D21Q8IYX1 336 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 ZNF548Q8NEK5 533 aaPredicted RBP12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 GTF2H4Q92759 462 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 BIRC7Q96CA5 298 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 PRPF18Q99633 342 aaKnown RBP12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 ZNF334Q9HCZ1 680 aaPredicted RBP12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 TMPRSS11EQ9UL52 423 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 USP22Q9UPT9 525 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 YIPF1Q9Y548 306 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 PCDHGA11Q9Y5H2 935 aa12.41□□□□□ -0.42
PPP4R3A-206ENST00000554943 GPR39O43194 453 aa12.4□□□□□ -0.42
PPP4R3A-206ENST00000554943 NDUFS3O75489 264 aa12.4□□□□□ -0.42
PPP4R3A-206ENST00000554943 OR4F21O95013 312 aa12.4□□□□□ -0.42
PPP4R3A-206ENST00000554943 CDH1P12830 882 aa12.4□□□□□ -0.42
PPP4R3A-206ENST00000554943 DCKP27707 260 aa12.4□□□□□ -0.42
PPP4R3A-206ENST00000554943 PWP1Q13610 501 aa12.4□□□□□ -0.42
PPP4R3A-206ENST00000554943 BOP1Q14137 746 aaKnown RBP12.4□□□□□ -0.42
PPP4R3A-206ENST00000554943 ABRAXAS2Q15018 415 aa12.4□□□□□ -0.42
PPP4R3A-206ENST00000554943 C18orf21Q32NC0 220 aaPredicted RBP12.4□□□□□ -0.42
PPP4R3A-206ENST00000554943 USP39Q53GS9 565 aaKnown RBP12.4□□□□□ -0.42
PPP4R3A-206ENST00000554943 LYPLAL1Q5VWZ2 237 aa12.4□□□□□ -0.42
PPP4R3A-206ENST00000554943 LAIR2Q6ISS4 152 aa12.4□□□□□ -0.42
PPP4R3A-206ENST00000554943 SNX20Q7Z614 316 aa12.4□□□□□ -0.42
PPP4R3A-206ENST00000554943 KIAA0907Q7Z7F0 614 aaPredicted RBP12.4□□□□□ -0.42
PPP4R3A-206ENST00000554943 HOMEZQ8IX15 550 aa12.4□□□□□ -0.42
PPP4R3A-206ENST00000554943 MYO1HQ8N1T3 1032 aa12.4□□□□□ -0.42
PPP4R3A-206ENST00000554943 LPCAT1Q8NF37 534 aa12.4□□□□□ -0.42
PPP4R3A-206ENST00000554943 VPS33AQ96AX1 596 aa12.4□□□□□ -0.42
PPP4R3A-206ENST00000554943 TUBGCP3Q96CW5 907 aa12.4□□□□□ -0.42
PPP4R3A-206ENST00000554943 TMEM74Q96NL1 305 aa12.4□□□□□ -0.42
PPP4R3A-206ENST00000554943 ACOX2Q99424 681 aa12.4□□□□□ -0.42
PPP4R3A-206ENST00000554943 NPLQ9BXD5 320 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms