RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 GDF10P55107 478 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 GNG11P61952 73 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 LAMB3Q13751 1172 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 TGIF1Q15583 401 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 OASLQ15646 514 aaKnown RBP8.55□□□□□ -1.04
ACTN1-213ENST00000554508 RPE65Q16518 533 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 BCL7AQ4VC05 210 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 TAF1BQ53T94 588 aaPredicted RBP8.55□□□□□ -1.04
ACTN1-213ENST00000554508 FNBP1LQ5T0N5 605 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 KLHL35Q6PF15 583 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 FAM129CQ86XR2 697 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 SLC13A5Q86YT5 568 aaPredicted RBP8.55□□□□□ -1.04
ACTN1-213ENST00000554508 NXPE1Q8N323 547 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 BMPERQ8N8U9 685 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 STYXQ8WUJ0 223 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 MAIP1Q8WWC4 291 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 ZDHHC12Q96GR4 267 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 CDKN2AIPNLQ96HQ2 116 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 C9orf72Q96LT7 481 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 COPS8Q99627 209 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 NLE1Q9NVX2 485 aaPredicted RBP8.55□□□□□ -1.04
ACTN1-213ENST00000554508 WDR70Q9NW82 654 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 ZDHHC3Q9NYG2 299 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 OGFRQ9NZT2 677 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 EPHA6Q9UF33 1036 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 ZNF148Q9UQR1 794 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 WDR37Q9Y2I8 494 aa8.55□□□□□ -1.04
ACTN1-213ENST00000554508 FASNP49327 2511 aaKnown RBP8.55□□□□□ -1.04
ACTN1-213ENST00000554508 IGLV3-16A0A075B6K0 115 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 TRBV5-4A0A0C4DH59 114 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 C17orf113A0A1B0GUU1 675 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 POLR1CO15160 346 aaPredicted RBP8.54□□□□□ -1.04
ACTN1-213ENST00000554508 CAPN5O15484 640 aaPredicted RBP8.54□□□□□ -1.04
ACTN1-213ENST00000554508 SUN1O94901 812 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 GAS8O95995 478 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 GSTM1P09488 218 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 ATP1B2P14415 290 aaPredicted RBP8.54□□□□□ -1.04
ACTN1-213ENST00000554508 PSMA3P25788 255 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 MC4RP32245 332 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 CXCR5P32302 372 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 CAPZBP47756 277 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 PRLHRP49683 370 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 ARSDP51689 593 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 TMPRSS15P98073 1019 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 GSTM4Q03013 218 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 CDH17Q12864 832 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 GPR18Q14330 331 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 NFE2L1Q14494 772 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 SKIDA1Q1XH10 827 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 ZRANB3Q5FWF4 1079 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 ANKS6Q68DC2 871 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 CYB5D1Q6P9G0 228 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 XKR5Q6UX68 686 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 FAM83HQ6ZRV2 1179 aaPredicted RBP8.54□□□□□ -1.04
ACTN1-213ENST00000554508 DET1Q7L5Y6 550 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 TTC9Q92623 222 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 NKD1Q969G9 470 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 DNAJC1Q96KC8 554 aaKnown RBP8.54□□□□□ -1.04
ACTN1-213ENST00000554508 CCM2Q9BSQ5 444 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 TLR10Q9BXR5 811 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 SPRY4Q9C004 299 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 TRIT1Q9H3H1 467 aaKnown RBP8.54□□□□□ -1.04
ACTN1-213ENST00000554508 ZNF768Q9H5H4 540 aaKnown RBP8.54□□□□□ -1.04
ACTN1-213ENST00000554508 FAM96AQ9H5X1 160 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 VPS37BQ9H9H4 285 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 KCND1Q9NSA2 647 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 SEMA5BQ9P283 1151 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 KLHL3Q9UH77 587 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 PILRAQ9UKJ1 303 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 PSMD13Q9UNM6 376 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 DRG1Q9Y295 367 aaKnown RBP8.54□□□□□ -1.04
ACTN1-213ENST00000554508 ZKSCAN5Q9Y2L8 839 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 HEBP2Q9Y5Z4 205 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 COLEC10Q9Y6Z7 277 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 SEC16AO15027 2179 aa8.54□□□□□ -1.04
ACTN1-213ENST00000554508 HEATR9A2RTY3 570 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 MROH6A6NGR9 719 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 QSOX1O00391 747 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 SGTAO43765 313 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 CEP104O60308 925 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 RASSF9O75901 435 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 IFNB1P01574 187 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 ITGB2P05107 769 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 SLC35G4P0C7Q5 338 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 MTHFD1P11586 935 aaKnown RBP8.53□□□□□ -1.04
ACTN1-213ENST00000554508 TPH1P17752 444 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 ACRV1P26436 265 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 MAP4P27816 1152 aaKnown RBP8.53□□□□□ -1.04
ACTN1-213ENST00000554508 NDUFS1P28331 727 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 PBLDP30039 288 aaPredicted RBP8.53□□□□□ -1.04
ACTN1-213ENST00000554508 LMAN1P49257 510 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 GFERP55789 205 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 CACNG1Q06432 222 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 C19orf57Q0VDD7 668 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 SEPT6Q14141 434 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 IL11RAQ14626 422 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 POU6F1Q14863 301 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 CCNG2Q16589 344 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 CACHD1Q5VU97 1274 aa8.53□□□□□ -1.04
ACTN1-213ENST00000554508 ZNF449Q6P9G9 518 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms