RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 MTHFD1P11586 935 aaKnown RBP6.47□□□□□ -1.37
SLIRP-203ENST00000554074 UGT1A6P19224 532 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 MSH3P20585 1137 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 UGT1A1P22309 533 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 UGT1A4P22310 534 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 CTNNA2P26232 953 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 RBL1P28749 1068 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 ADRA1AP35348 466 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 ATP5OP48047 213 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 LEPRP48357 1165 aaKnown RBP6.47□□□□□ -1.37
SLIRP-203ENST00000554074 CTSCP53634 463 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 DRG2P55039 364 aaKnown RBP6.47□□□□□ -1.37
SLIRP-203ENST00000554074 FOXM1Q08050 763 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 MSLNQ13421 630 aaPredicted RBP6.47□□□□□ -1.37
SLIRP-203ENST00000554074 SEPT7Q16181 437 aaKnown RBP6.47□□□□□ -1.37
SLIRP-203ENST00000554074 RPE65Q16518 533 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 BCL7AQ4VC05 210 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 FAM182AQ5T1J6 154 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 GPRC6AQ5T6X5 926 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 CACHD1Q5VU97 1274 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 TMEM220Q6QAJ8 160 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 C6orf15Q6UXA7 325 aaPredicted RBP6.47□□□□□ -1.37
SLIRP-203ENST00000554074 FAM151BQ6UXP7 276 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 ZNF662Q6ZS27 426 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 PRICKLE2Q7Z3G6 844 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 DAAM2Q86T65 1068 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 PPP1R3BQ86XI6 285 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 TMEM139Q8IV31 216 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 CDKL3Q8IVW4 592 aaPredicted RBP6.47□□□□□ -1.37
SLIRP-203ENST00000554074 LRRC8AQ8IWT6 810 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 SLC25A41Q8N5S1 370 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 OR2L2Q8NH16 312 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 ACTL9Q8TC94 416 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 ZNF398Q8TD17 642 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 HEXDCQ8WVB3 486 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 APOBEC4Q8WW27 367 aaKnown RBP6.47□□□□□ -1.37
SLIRP-203ENST00000554074 STARD8Q92502 1023 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 RSC1A1Q92681 617 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 ULK4Q96C45 1275 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 HAUS1Q96CS2 278 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 MS4A3Q96HJ5 214 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 SLC41A2Q96JW4 573 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 OR6C1Q96RD1 312 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 GORASP1Q9BQQ3 440 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 OSBPL8Q9BZF1 889 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 ULBP3Q9BZM4 244 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 UGT1A7Q9HAW7 530 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 UGT1A10Q9HAW8 530 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 UGT1A8Q9HAW9 530 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 ARNT2Q9HBZ2 717 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 PDE7BQ9NP56 450 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 IL17BQ9UHF5 180 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 KCND3Q9UK17 655 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 ACSL5Q9ULC5 683 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 KCTD3Q9Y597 815 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 PCDHGA6Q9Y5G7 932 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 RPS6KL1Q9Y6S9 549 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 FLNCQ14315 2725 aa6.47□□□□□ -1.37
SLIRP-203ENST00000554074 C17orf113A0A1B0GUU1 675 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 OR2AG2A6NM03 316 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 C21orf140B9A014 251 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 MATN2O00339 956 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 GPR39O43194 453 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 KIF1CO43896 1103 aaKnown RBP6.46□□□□□ -1.38
SLIRP-203ENST00000554074 SPAG6O75602 509 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 RASSF9O75901 435 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 SRP72O76094 671 aaKnown RBP6.46□□□□□ -1.38
SLIRP-203ENST00000554074 TJP3O95049 919 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 PRAMEF1O95521 474 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 CRTAMO95727 393 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 AGTP01019 485 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 CCNYL3P0C7X3 344 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 MSL3P1P0C860 447 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 RBP3P10745 1247 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 RALBP11234 206 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 ZNF28P17035 718 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 TCN2P20062 427 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 NDUFS1P28331 727 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 OAS2P29728 719 aaKnown RBP6.46□□□□□ -1.38
SLIRP-203ENST00000554074 AKT1P31749 480 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 CA5AP35218 305 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 HADHAP40939 763 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 CETN2P41208 172 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 SEPHS1P49903 392 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 VAV2P52735 878 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 RWDD2BP57060 319 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 SH3BP2P78314 561 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 OTUD4Q01804 1114 aaKnown RBP6.46□□□□□ -1.38
SLIRP-203ENST00000554074 ACY1Q03154 408 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 NFE2L1Q14494 772 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 PRPSAP1Q14558 356 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 LLGL1Q15334 1064 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 GPR33Q49SQ1 333 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 ANKRD20A2Q5SQ80 823 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 FNBP1LQ5T0N5 605 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 CCDC181Q5TID7 509 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 ANKRD20A1Q5TYW2 823 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 ANKRD20A3Q5VUR7 823 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 IRGCQ6NXR0 463 aa6.46□□□□□ -1.38
SLIRP-203ENST00000554074 FAM83HQ6ZRV2 1179 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms