RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 FBXO38Q6PIJ6 1188 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 XKRXQ6PP77 449 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 IGFL2Q6UWQ7 119 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 CARFQ8N187 725 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 OR1L3Q8NH93 324 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 CNDP1Q96KN2 507 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 LYSMD1Q96S90 227 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 SPATA16Q9BXB7 569 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 CWC15Q9P013 229 aaKnown RBP13.45□□□□□ -0.26
PRPF39-204ENST00000553605 PCSK1NQ9UHG2 260 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 PTRH2Q9Y3E5 179 aaKnown RBP13.45□□□□□ -0.26
PRPF39-204ENST00000553605 TMEM150CB9EJG8 249 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 PCDH17O14917 1159 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 FAM155BO75949 473 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 CDK14O94921 469 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 PRLP01236 227 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 SPTBP11277 2137 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 VCLP18206 1134 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 FOLR3P41439 243 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 CDH6P55285 790 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 AIMP2Q13155 320 aaKnown RBP13.44□□□□□ -0.26
PRPF39-204ENST00000553605 DPYSQ14117 519 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 IHHQ14623 411 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 RPE65Q16518 533 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 CYP2A13Q16696 494 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 CLEC16AQ2KHT3 1053 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 AGAP7PQ5VUJ5 663 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 ARMC6Q6NXE6 501 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 B4GALNT4Q76KP1 1039 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 OOSP2Q86WS3 158 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.44□□□□□ -0.26
PRPF39-204ENST00000553605 GLYATL1Q969I3 302 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 PPM1MQ96MI6 270 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 AGAP4Q96P64 663 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 PEBP4Q96S96 227 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 C17orf62Q9BQA9 187 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 TMUB1Q9BVT8 246 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 TDRD1Q9BXT4 1180 aaKnown RBP13.44□□□□□ -0.26
PRPF39-204ENST00000553605 POLR1EQ9GZS1 481 aaKnown RBP13.44□□□□□ -0.26
PRPF39-204ENST00000553605 MCCC2Q9HCC0 563 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 SYTL2Q9HCH5 934 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 SERTAD3Q9UJW9 196 aa13.44□□□□□ -0.26
PRPF39-204ENST00000553605 CCDC78A2IDD5 438 aa13.43□□□□□ -0.26
PRPF39-204ENST00000553605 SLC9B1P1A6NJY1 282 aa13.43□□□□□ -0.26
PRPF39-204ENST00000553605 C19orf84I3L1E1 186 aa13.43□□□□□ -0.26
PRPF39-204ENST00000553605 MTX2O75431 263 aa13.43□□□□□ -0.26
PRPF39-204ENST00000553605 PRKCSHP14314 528 aaPredicted RBP13.43□□□□□ -0.26
PRPF39-204ENST00000553605 TDGF1P3P51864 188 aa13.43□□□□□ -0.26
PRPF39-204ENST00000553605 KPNA2P52292 529 aaKnown RBP13.43□□□□□ -0.26
PRPF39-204ENST00000553605 ZNF135P52742 658 aaPredicted RBP13.43□□□□□ -0.26
PRPF39-204ENST00000553605 RPL26P61254 145 aaKnown RBP13.43□□□□□ -0.26
PRPF39-204ENST00000553605 TLE4Q04727 773 aa13.43□□□□□ -0.26
PRPF39-204ENST00000553605 ALS2CLQ60I27 953 aa13.43□□□□□ -0.26
PRPF39-204ENST00000553605 ZNF385CQ66K41 422 aaPredicted RBP13.43□□□□□ -0.26
PRPF39-204ENST00000553605 ZNF324BQ6AW86 544 aaPredicted RBP13.43□□□□□ -0.26
PRPF39-204ENST00000553605 RPUSD3Q6P087 351 aaKnown RBP13.43□□□□□ -0.26
PRPF39-204ENST00000553605 GFRALQ6UXV0 394 aa13.43□□□□□ -0.26
PRPF39-204ENST00000553605 MON1BQ7L1V2 547 aa13.43□□□□□ -0.26
PRPF39-204ENST00000553605 PPP1R32Q7Z5V6 425 aa13.43□□□□□ -0.26
PRPF39-204ENST00000553605 C11orf96Q7Z7L8 435 aa13.43□□□□□ -0.26
PRPF39-204ENST00000553605 CEP97Q8IW35 865 aa13.43□□□□□ -0.26
PRPF39-204ENST00000553605 ATPAF2Q8N5M1 289 aa13.43□□□□□ -0.26
PRPF39-204ENST00000553605 TEX26Q8N6G2 289 aa13.43□□□□□ -0.26
PRPF39-204ENST00000553605 LPCAT1Q8NF37 534 aa13.43□□□□□ -0.26
PRPF39-204ENST00000553605 CHTF18Q8WVB6 975 aa13.43□□□□□ -0.26
PRPF39-204ENST00000553605 ZSCAN5AQ9BUG6 496 aa13.43□□□□□ -0.26
PRPF39-204ENST00000553605 PCDH9Q9HC56 1237 aa13.43□□□□□ -0.26
PRPF39-204ENST00000553605 GPN3Q9UHW5 284 aaPredicted RBP13.43□□□□□ -0.26
PRPF39-204ENST00000553605 RPL26L1Q9UNX3 145 aaKnown RBP13.43□□□□□ -0.26
PRPF39-204ENST00000553605 NEU2Q9Y3R4 380 aa13.43□□□□□ -0.26
PRPF39-204ENST00000553605 OR6C74A6NCV1 312 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 E7EQ34 232 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 AGPSO00116 658 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 ZNF749O43361 778 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 CD63P08962 238 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 HBQ1P09105 142 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 AMPD1P23109 780 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 CES1P23141 567 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 PBX1P40424 430 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 PREPP48147 710 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 ART1P52961 327 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 DSC2Q02487 901 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 PRKD1Q15139 912 aaPredicted RBP13.42□□□□□ -0.26
PRPF39-204ENST00000553605 TMCO3Q6UWJ1 677 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 TMEM207Q6UWW9 146 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 TRAM1L1Q8N609 369 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 GPR26Q8NDV2 337 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 OR2Y1Q8NGV0 311 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 PTERQ96BW5 349 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 TUBGCP2Q9BSJ2 902 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 NUP85Q9BW27 656 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 EPS8L2Q9H6S3 715 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 ZWILCHQ9H900 591 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 ETNK2Q9NVF9 386 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 PSMD13Q9UNM6 376 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 SEC16AO15027 2179 aa13.42□□□□□ -0.26
PRPF39-204ENST00000553605 PES1O00541 588 aaKnown RBP13.41□□□□□ -0.26
PRPF39-204ENST00000553605 PRPSAP2O60256 369 aa13.41□□□□□ -0.26
PRPF39-204ENST00000553605 KCNJ13O60928 360 aa13.41□□□□□ -0.26
PRPF39-204ENST00000553605 MSL3P1P0C860 447 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms