RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 WDFY3Q8IZQ1 3526 aa18.09■□□□□ 0.49
CPSF2-202ENST00000553427 USP24Q9UPU5 2620 aa18.08■□□□□ 0.49
CPSF2-202ENST00000553427 GOLGA8MH3BSY2 632 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 CD3EAPO15446 510 aaKnown RBP18.08■□□□□ 0.48
CPSF2-202ENST00000553427 DUX1O43812 170 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 DXOO77932 396 aaKnown RBP18.08■□□□□ 0.48
CPSF2-202ENST00000553427 VIPP01282 170 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 PAMP19021 973 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 LSSP48449 732 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 EIF3IQ13347 325 aaKnown RBP18.08■□□□□ 0.48
CPSF2-202ENST00000553427 CLCA4Q14CN2 919 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 MORF4L2Q15014 288 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 RPE65Q16518 533 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 IZUMO3Q5VZ72 239 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 TMEM26Q6ZUK4 368 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 ZNF572Q7Z3I7 529 aaPredicted RBP18.08■□□□□ 0.48
CPSF2-202ENST00000553427 B3GNT8Q7Z7M8 397 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 TMEM135Q86UB9 458 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 PIM3Q86V86 326 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 SPATA4Q8NEY3 305 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 NAT14Q8WUY8 206 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 TMEM159Q96B96 161 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 CXorf40BQ96DE9 158 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 ATXN7L3BQ96GX2 97 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 STRADBQ9C0K7 418 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 CCDC86Q9H6F5 360 aaKnown RBP18.08■□□□□ 0.48
CPSF2-202ENST00000553427 COG4Q9H9E3 785 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 SLC40A1Q9NP59 571 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 MARCH4Q9P2E8 410 aaPredicted RBP18.08■□□□□ 0.48
CPSF2-202ENST00000553427 ANAPC5Q9UJX4 755 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 ATXN7L1Q9ULK2 861 aaPredicted RBP18.08■□□□□ 0.48
CPSF2-202ENST00000553427 PCDHGA8Q9Y5G5 932 aa18.08■□□□□ 0.48
CPSF2-202ENST00000553427 APC2O95996 2303 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 CCDC187A0A096LP49 1063 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 OR52A4PA6NMU1 304 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 TTI1O43156 1089 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 FTH1P02794 183 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 SLC35G4P0C7Q5 338 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 OR56A5P0C7T3 313 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 MTHFD1P11586 935 aaKnown RBP18.07■□□□□ 0.48
CPSF2-202ENST00000553427 CSF2RBP32927 897 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 MLLT3P42568 568 aaPredicted RBP18.07■□□□□ 0.48
CPSF2-202ENST00000553427 ARCN1P48444 511 aaKnown RBP18.07■□□□□ 0.48
CPSF2-202ENST00000553427 SEMA3AQ14563 771 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 TYSND1Q2T9J0 566 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 AMZ1Q400G9 498 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 CAPRIN2Q6IMN6 1127 aaKnown RBP18.07■□□□□ 0.48
CPSF2-202ENST00000553427 MRNIPQ6NTE8 343 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 CASC4Q6P4E1 433 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 WDR74Q6RFH5 385 aaPredicted RBP18.07■□□□□ 0.48
CPSF2-202ENST00000553427 TMPRSS9Q7Z410 1059 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 OR4D9Q8NGE8 314 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 GPR150Q8NGU9 434 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 ZFPM2Q8WW38 1151 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 ZCCHC14Q8WYQ9 949 aaKnown RBP18.07■□□□□ 0.48
CPSF2-202ENST00000553427 SIGLEC10Q96LC7 697 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 NUDT22Q9BRQ3 303 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 POLR1BQ9H9Y6 1135 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.07■□□□□ 0.48
CPSF2-202ENST00000553427 PDP2Q9P2J9 529 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 PRSS21Q9Y6M0 314 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 UNC13CQ8NB66 2214 aa18.07■□□□□ 0.48
CPSF2-202ENST00000553427 DMXL2Q8TDJ6 3036 aa18.06■□□□□ 0.48
CPSF2-202ENST00000553427 PRMT5O14744 637 aaPredicted RBP18.06■□□□□ 0.48
CPSF2-202ENST00000553427 NDC80O14777 642 aa18.06■□□□□ 0.48
CPSF2-202ENST00000553427 LIN7AO14910 233 aaPredicted RBP18.06■□□□□ 0.48
CPSF2-202ENST00000553427 OR1I1O60431 355 aa18.06■□□□□ 0.48
CPSF2-202ENST00000553427 USP1O94782 785 aa18.06■□□□□ 0.48
CPSF2-202ENST00000553427 VAPBO95292 243 aa18.06■□□□□ 0.48
CPSF2-202ENST00000553427 TUBB4AP04350 444 aa18.06■□□□□ 0.48
CPSF2-202ENST00000553427 CD151P48509 253 aa18.06■□□□□ 0.48
CPSF2-202ENST00000553427 TRA2AQ13595 282 aaKnown RBP eCLIP18.06■□□□□ 0.48
CPSF2-202ENST00000553427 ANKRD20A4Q4UJ75 823 aa18.06■□□□□ 0.48
CPSF2-202ENST00000553427 DNAJC21Q5F1R6 531 aaKnown RBP18.06■□□□□ 0.48
CPSF2-202ENST00000553427 RNF187Q5TA31 235 aaPredicted RBP18.06■□□□□ 0.48
CPSF2-202ENST00000553427 LRRC6Q86X45 466 aa18.06■□□□□ 0.48
CPSF2-202ENST00000553427 ZNF761Q86XN6 746 aaPredicted RBP18.06■□□□□ 0.48
CPSF2-202ENST00000553427 CFAP206Q8IYR0 622 aa18.06■□□□□ 0.48
CPSF2-202ENST00000553427 LSMEM2Q8N112 164 aa18.06■□□□□ 0.48
CPSF2-202ENST00000553427 AGGF1Q8N302 714 aaeCLIP18.06■□□□□ 0.48
CPSF2-202ENST00000553427 WDR36Q8NI36 951 aaKnown RBP18.06■□□□□ 0.48
CPSF2-202ENST00000553427 RMDN2Q96LZ7 410 aa18.06■□□□□ 0.48
CPSF2-202ENST00000553427 C16orf45Q96MC5 204 aaPredicted RBP18.06■□□□□ 0.48
CPSF2-202ENST00000553427 TCF12Q99081 682 aa18.06■□□□□ 0.48
CPSF2-202ENST00000553427 KRT12Q99456 494 aa18.06■□□□□ 0.48
CPSF2-202ENST00000553427 WWP1Q9H0M0 922 aa18.06■□□□□ 0.48
CPSF2-202ENST00000553427 OR52A5Q9H2C5 316 aa18.06■□□□□ 0.48
CPSF2-202ENST00000553427 RDH14Q9HBH5 336 aa18.06■□□□□ 0.48
CPSF2-202ENST00000553427 HEBP2Q9Y5Z4 205 aa18.06■□□□□ 0.48
CPSF2-202ENST00000553427 ANKRD11Q6UB99 2663 aaPredicted RBP18.06■□□□□ 0.48
CPSF2-202ENST00000553427 ZCWPW2A0A1B0GU75 182 aa18.05■□□□□ 0.48
CPSF2-202ENST00000553427 A0A1W2PNU3 283 aaPredicted RBP18.05■□□□□ 0.48
CPSF2-202ENST00000553427 FAM187AA6NFU0 413 aa18.05■□□□□ 0.48
CPSF2-202ENST00000553427 HGSO14964 777 aaPredicted RBP18.05■□□□□ 0.48
CPSF2-202ENST00000553427 SEC31AO94979 1220 aaKnown RBP18.05■□□□□ 0.48
CPSF2-202ENST00000553427 OGNP20774 298 aaKnown RBP18.05■□□□□ 0.48
CPSF2-202ENST00000553427 RPS3P23396 243 aaKnown RBP eCLIP18.05■□□□□ 0.48
CPSF2-202ENST00000553427 NDUFS1P28331 727 aa18.05■□□□□ 0.48
CPSF2-202ENST00000553427 LIMK2P53671 638 aa18.05■□□□□ 0.48
CPSF2-202ENST00000553427 ADARP55265 1226 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms