RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 IGLV3-10A0A075B6K4 115 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 KRBA1A5PL33 1030 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 E2F3O00716 465 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 SERPINF2P08697 491 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 ITIH1P19827 911 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 PIGAP37287 484 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 CPT1AP50416 773 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 MRPS6P82932 125 aaKnown RBP17.32■□□□□ 0.36
SYNE3-202ENST00000553340 PIGFQ07326 219 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 CD47Q08722 323 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 KCNAB2Q13303 367 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 SERINC3Q13530 473 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 PTPRNQ16849 979 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 CTU2Q2VPK5 515 aaKnown RBP17.32■□□□□ 0.36
SYNE3-202ENST00000553340 PARP15Q460N3 678 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 FBXL22Q6P050 247 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 AFTPHQ6ULP2 937 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 ANKRD13BQ86YJ7 626 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 GPSM1Q86YR5 675 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 IGSF8Q969P0 613 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 KATNAL1Q9BW62 490 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 LTB4R2Q9NPC1 389 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 USE1Q9NZ43 259 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 ITGB1BP2Q9UKP3 347 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 MUSKO15146 869 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 UGT2B11O75310 529 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 VPS26AO75436 327 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 DGKQP52824 942 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 ERVPABLB-1P60509 514 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 BEX3Q00994 111 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 DPY19L1Q2PZI1 675 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 CYP20A1Q6UW02 462 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 ENPP6Q6UWR7 440 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 NECAB2Q7Z6G3 386 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 FAM86B1Q8N7N1 296 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 ATP6V0D2Q8N8Y2 350 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 GIPC2Q8TF65 315 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 SLC10A4Q96EP9 437 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 CDK15Q96Q40 435 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 NODALQ96S42 347 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 LIMD1Q9UGP4 676 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 XYLBO75191 536 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 NDST3O95803 873 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 TMED10P49755 219 aaKnown RBP17.31■□□□□ 0.36
SYNE3-202ENST00000553340 EIF2B2P49770 351 aaKnown RBP17.31■□□□□ 0.36
SYNE3-202ENST00000553340 PLIN5Q00G26 463 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 RAP1GAP2Q684P5 730 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 IL27RAQ6UWB1 636 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 PIWIL3Q7Z3Z3 882 aaKnown RBP17.31■□□□□ 0.36
SYNE3-202ENST00000553340 OR52B6Q8NGF0 335 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 METTL6Q8TCB7 284 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 ACTL8Q9H568 366 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 CARS2Q9HA77 564 aaKnown RBP17.31■□□□□ 0.36
SYNE3-202ENST00000553340 ADGRE2Q9UHX3 823 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 C3orf18Q9UK00 162 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 SLC27A5Q9Y2P5 690 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 ASB1Q9Y576 335 aa17.31■□□□□ 0.36
SYNE3-202ENST00000553340 NLRC5Q86WI3 1866 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 MYO16Q9Y6X6 1858 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 FAM92AA1XBS5 289 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 UGT2B4P06133 528 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 AGXTP21549 392 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 FUT4P22083 530 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 HK3P52790 923 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 RPS3AP61247 264 aaKnown RBP17.3■□□□□ 0.36
SYNE3-202ENST00000553340 CTF1Q16619 201 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 CD300LGQ6UXG3 332 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 BTLAQ7Z6A9 289 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 RBM23Q86U06 439 aaKnown RBP17.3■□□□□ 0.36
SYNE3-202ENST00000553340 HS3ST5Q8IZT8 346 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 S100ZQ8WXG8 99 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 SLC47A1Q96FL8 570 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 BTN2A3PQ96KV6 586 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 GIN1Q9NXP7 522 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 TRMT6Q9UJA5 497 aaKnown RBP17.3■□□□□ 0.36
SYNE3-202ENST00000553340 TRPV2Q9Y5S1 764 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 GBF1Q92538 1859 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 PTGES3LE9PB15 166 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 SLC1A7O00341 560 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 NDUFS2O75306 463 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 CAPN1P07384 714 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 ACVRL1P37023 503 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 ZNF140P52738 457 aaPredicted RBP17.3■□□□□ 0.36
SYNE3-202ENST00000553340 IL2P60568 153 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 NR6A1Q15406 480 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 LETMD1Q6P1Q0 360 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 SPESP1Q6UW49 350 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 LINC00299Q6ZSB3 139 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 OR4K2Q8NGD2 314 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 CCDC90BQ9GZT6 254 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 ACTR8Q9H981 624 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 VAPAQ9P0L0 249 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 MTRRQ9UBK8 725 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 SCML2Q9UQR0 700 aa17.3■□□□□ 0.36
SYNE3-202ENST00000553340 LOC100130705A0A1B0GUX0 176 aa17.29■□□□□ 0.36
SYNE3-202ENST00000553340 TTC36A6NLP5 189 aa17.29■□□□□ 0.36
SYNE3-202ENST00000553340 PRAMEF11O60813 436 aa17.29■□□□□ 0.36
SYNE3-202ENST00000553340 INMTO95050 263 aa17.29■□□□□ 0.36
SYNE3-202ENST00000553340 TSPAN12O95859 305 aa17.29■□□□□ 0.36
SYNE3-202ENST00000553340 PKMP14618 531 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms