RNA–Protein interactions for RNA: ENST00000552984.1

TUBA1B-208, Transcript of tubulin alpha 1b, human

TSL 4

Gene TUBA1B, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1B-208	ENST00000552984	LDLRAP1	Q5SW96	308 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	CCDC181	Q5TID7	509 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	FBXO38	Q6PIJ6	1188 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	TMEM135	Q86UB9	458 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	RASGRP3	Q8IV61	690 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	OR4K2	Q8NGD2	314 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	OR13C4	Q8NGS5	318 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	CCDC110	Q8TBZ0	833 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	BRSK1	Q8TDC3	778 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	PPM1M	Q96MI6	270 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	INSM2	Q96T92	566 aa	Predicted RBP	11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	NRTN	Q99748	197 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	MAP3K3	Q99759	626 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ZCCHC2	Q9C0B9	1178 aa	Known RBP	11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	WWP1	Q9H0M0	922 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	EPN3	Q9H201	632 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ADNP	Q9H2P0	1102 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	FAM96A	Q9H5X1	160 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	SMOX	Q9NWM0	555 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	SEC16A	O15027	2179 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	PCSK5	Q92824	1860 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984		A0A0U1RQJ8	604 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	KCNN4	O15554	427 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	SGTA	O43765	313 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	SPAG6	O75602	509 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	EBLN1	P0CF75	366 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	MTHFD1	P11586	935 aa	Known RBP	11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	SFTPC	P11686	197 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	FOLR1	P15328	257 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	TCN2	P20062	427 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	MSH3	P20585	1137 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	FECH	P22830	423 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ADRA1A	P35348	466 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	GEM	P55040	296 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	EIF3E	P60228	445 aa	Known RBP	11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	MSLN	Q13421	630 aa	Predicted RBP	11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	XRCC4	Q13426	336 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ITGA9	Q13797	1035 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ERV3-1	Q14264	604 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	SPA17	Q15506	151 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ANKRD20A2	Q5SQ80	823 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ANKRD20A1	Q5TYW2	823 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ANKRD20A3	Q5VUR7	823 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ZDHHC20	Q5W0Z9	365 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	C6orf15	Q6UXA7	325 aa	Predicted RBP	11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	RAD9B	Q6WBX8	426 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ESX1	Q8N693	406 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ACRBP	Q8NEB7	543 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ZNF398	Q8TD17	642 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	KLHL6	Q8WZ60	621 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ALG3	Q92685	438 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	STAMBPL1	Q96FJ0	436 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	RMDN2	Q96LZ7	410 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	C12orf66	Q96MD2	445 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	OSBPL8	Q9BZF1	889 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	LACRT	Q9GZZ8	138 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ASB8	Q9H765	288 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	TRHDE	Q9UKU6	1024 aa		11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
TUBA1B-208	ENST00000552984		K7EM74	188 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	TOX3	O15405	576 aa	Predicted RBP	11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	KATNA1	O75449	491 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ANXA9	O76027	345 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	SRP72	O76094	671 aa	Known RBP	11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	POLB	P06746	335 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	PRSS56	P0CW18	603 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	RBP3	P10745	1247 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	FGF5	P12034	268 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	NELFE	P18615	380 aa	Known RBP	11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	LPO	P22079	712 aa	Predicted RBP	11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	CYLC1	P35663	651 aa	Predicted RBP	11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	CDKN1C	P49918	316 aa	Predicted RBP	11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	CSRP3	P50461	194 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ZNF140	P52738	457 aa	Predicted RBP	11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	XIAP	P98170	497 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	TUBB3	Q13509	450 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	MAP7	Q14244	749 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	TAF1A	Q15573	450 aa	Predicted RBP	11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	METRNL	Q641Q3	311 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ITPRIPL1	Q6GPH6	555 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	PWWP2B	Q6NUJ5	590 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	RANBP10	Q6VN20	620 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	CDKL3	Q8IVW4	592 aa	Predicted RBP	11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	RBM12B	Q8IXT5	1001 aa	Known RBP	11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	CCDC170	Q8IYT3	715 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	DTX3L	Q8TDB6	740 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	CT55	Q8WUE5	264 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ZDHHC12	Q96GR4	267 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	CATSPER2	Q96P56	530 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	TRIT1	Q9H3H1	467 aa	Known RBP	11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	PIH1D1	Q9NWS0	290 aa	Known RBP	11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	EPHA6	Q9UF33	1036 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	PACSIN2	Q9UNF0	486 aa	Predicted RBP	11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	PCDHA3	Q9Y5H8	950 aa		11.23	□□□□□ -0.61
TUBA1B-208	ENST00000552984	CCDC78	A2IDD5	438 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	GRID2IP	A4D2P6	1211 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	OR5K3	A6NET4	321 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	MGAT4D	A6NG13	374 aa		11.22	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms