RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	ADGRG6	Q86SQ4	1221 aa		12.48	□□□□□ -0.41
CACNB3-223	ENST00000552480	CUZD1	Q86UP6	607 aa		12.48	□□□□□ -0.41
CACNB3-223	ENST00000552480	AFAP1L2	Q8N4X5	818 aa		12.48	□□□□□ -0.41
CACNB3-223	ENST00000552480	PDPR	Q8NCN5	879 aa		12.48	□□□□□ -0.41
CACNB3-223	ENST00000552480	RPLP0P6	Q8NHW5	317 aa		12.48	□□□□□ -0.41
CACNB3-223	ENST00000552480	GANC	Q8TET4	914 aa		12.48	□□□□□ -0.41
CACNB3-223	ENST00000552480	ELMO1	Q92556	727 aa		12.48	□□□□□ -0.41
CACNB3-223	ENST00000552480	ERP27	Q96DN0	273 aa		12.48	□□□□□ -0.41
CACNB3-223	ENST00000552480	SIPA1	Q96FS4	1042 aa		12.48	□□□□□ -0.41
CACNB3-223	ENST00000552480	HIC2	Q96JB3	615 aa		12.48	□□□□□ -0.41
CACNB3-223	ENST00000552480	FAR2	Q96K12	515 aa		12.48	□□□□□ -0.41
CACNB3-223	ENST00000552480	CCM2	Q9BSQ5	444 aa		12.48	□□□□□ -0.41
CACNB3-223	ENST00000552480	RDH14	Q9HBH5	336 aa		12.48	□□□□□ -0.41
CACNB3-223	ENST00000552480	ZDHHC2	Q9UIJ5	367 aa		12.48	□□□□□ -0.41
CACNB3-223	ENST00000552480	ZFP69B	Q9UJL9	534 aa		12.48	□□□□□ -0.41
CACNB3-223	ENST00000552480	ADAMTS6	Q9UKP5	1117 aa		12.48	□□□□□ -0.41
CACNB3-223	ENST00000552480	FZD4	Q9ULV1	537 aa		12.48	□□□□□ -0.41
CACNB3-223	ENST00000552480	MMP17	Q9ULZ9	603 aa		12.48	□□□□□ -0.41
CACNB3-223	ENST00000552480	APOBEC2	Q9Y235	224 aa	Known RBP	12.48	□□□□□ -0.41
CACNB3-223	ENST00000552480	CDH23	Q9H251	3354 aa		12.48	□□□□□ -0.41
CACNB3-223	ENST00000552480	LRRC14B	A6NHZ5	514 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	NCF1B	A6NI72	391 aa	Predicted RBP	12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	OR2AG2	A6NM03	316 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	NCF1C	A8MVU1	366 aa	Predicted RBP	12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	LOC730098	B7Z3J9	87 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	SLC16A5	O15375	505 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	HDAC3	O15379	428 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	VEGFD	O43915	354 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	GPC4	O75487	556 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	CDK14	O94921	469 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	SIX3	O95343	332 aa	Predicted RBP	12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	PCCB	P05166	539 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	C8G	P07360	202 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	ENO2	P09104	434 aa	Predicted RBP	12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	GSTM1	P09488	218 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	NCF1	P14598	390 aa	Predicted RBP	12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	SERPINB3	P29508	390 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	IDH3A	P50213	366 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	RPS21	P63220	83 aa	Known RBP	12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	GSTM4	Q03013	218 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	HSPA14	Q0VDF9	509 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	SP140	Q13342	867 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	BOP1	Q14137	746 aa	Known RBP	12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	MLF2	Q15773	248 aa	Predicted RBP	12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	WSCD2	Q2TBF2	565 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	SYTL3	Q4VX76	610 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	CDKL4	Q5MAI5	379 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	SH2D4B	Q5SQS7	431 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	FAM91A1	Q658Y4	838 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	ANKS6	Q68DC2	871 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	PNCK	Q6P2M8	343 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	TMEM220	Q6QAJ8	160 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	EPGN	Q6UW88	154 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	RPS27L	Q71UM5	84 aa	Known RBP	12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	MTDH	Q86UE4	582 aa	Known RBP	12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	KBTBD6	Q86V97	674 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	BEND7	Q8N7W2	519 aa	Predicted RBP	12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	PLA2G15	Q8NCC3	412 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	OR14C36	Q8NHC7	312 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	AGR3	Q8TD06	166 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	ZNF483	Q8TF39	744 aa	Predicted RBP	12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	ASZ1	Q8WWH4	475 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	GLMN	Q92990	594 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	COX14	Q96I36	57 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	ZNF514	Q96K75	400 aa	Predicted RBP	12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	EBF4	Q9BQW3	602 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	C1QTNF2	Q9BXJ5	285 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	SHCBP1L	Q9BZQ2	653 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	SLC6A17	Q9H1V8	727 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	OR2AG1	Q9H205	316 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	COG4	Q9H9E3	785 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	ACTR5	Q9H9F9	607 aa	Predicted RBP	12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	TRIM39	Q9HCM9	518 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	PREB	Q9HCU5	417 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	DUSP12	Q9UNI6	340 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	ZFR2	Q9UPR6	939 aa	Known RBP	12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	NCKAP1	Q9Y2A7	1128 aa		12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	TNPO3	Q9Y5L0	923 aa	Known RBP	12.47	□□□□□ -0.41
CACNB3-223	ENST00000552480	LAMA3	Q16787	3333 aa		12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	HGS	O14964	777 aa	Predicted RBP	12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	FFAR2	O15552	330 aa		12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	GRID2	O43424	1007 aa		12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	CCDC22	O60826	627 aa		12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	RNGTT	O60942	597 aa	Known RBP	12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	LILRB5	O75023	590 aa		12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	SLCO2B1	O94956	709 aa		12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	VCL	P18206	1134 aa		12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	ADPRH	P54922	357 aa		12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	CDKL1	Q00532	357 aa		12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	TUBB3	Q13509	450 aa		12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	PCBP2	Q15366	365 aa	Known RBP eCLIP	12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	ZNF658B	Q4V348	819 aa	Predicted RBP	12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	TMEM259	Q4ZIN3	620 aa		12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	NEK5	Q6P3R8	708 aa		12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	CLNK	Q7Z7G1	428 aa		12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	TRIM74	Q86UV6	250 aa		12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	ALYREF	Q86V81	257 aa	Known RBP	12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	TP53I13	Q8NBR0	393 aa	Predicted RBP	12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	UBTD2	Q8WUN7	234 aa		12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	RILP	Q96NA2	401 aa		12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms