RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 H7C0S8 307 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 KCNJ13O60928 360 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 SPTA1P02549 2419 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 ETS1P14921 441 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 AKT1P31749 480 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 GRIA1P42261 906 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 PRLHRP49683 370 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 SH3BP2P78314 561 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 CCZ1BP86790 482 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 CCZ1P86791 482 aaPredicted RBP12.75□□□□□ -0.37
NPAS3-209ENST00000551008 KCTD19Q17RG1 926 aaPredicted RBP12.75□□□□□ -0.37
NPAS3-209ENST00000551008 MEI1Q5TIA1 1274 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 PLXDC1Q8IUK5 500 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 TRIM48Q8IWZ4 208 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 OR2L2Q8NH16 312 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 C1orf54Q8WWF1 131 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 WBP1Q96G27 269 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 TGM7Q96PF1 710 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 INSM2Q96T92 566 aaPredicted RBP12.75□□□□□ -0.37
NPAS3-209ENST00000551008 NRTNQ99748 197 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 FERMT1Q9BQL6 677 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 SLC12A9Q9BXP2 914 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 ZMYND15Q9H091 742 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 WWP1Q9H0M0 922 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 FBXO8Q9NRD0 319 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 NLE1Q9NVX2 485 aaPredicted RBP12.75□□□□□ -0.37
NPAS3-209ENST00000551008 SEMA5BQ9P283 1151 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 EPHA6Q9UF33 1036 aa12.75□□□□□ -0.37
NPAS3-209ENST00000551008 FEZ2Q9UHY8 353 aaPredicted RBP12.75□□□□□ -0.37
NPAS3-209ENST00000551008 CCDC78A2IDD5 438 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 GOLGA6L9A6NEM1 432 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 MGAT4DA6NG13 374 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 MROH6A6NGR9 719 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 CAPN5O15484 640 aaPredicted RBP12.74□□□□□ -0.37
NPAS3-209ENST00000551008 ARHGAP6O43182 974 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 RAD1O60671 282 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 CRTAMO95727 393 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 DLGAP3O95886 979 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 MTHFD1P11586 935 aaKnown RBP12.74□□□□□ -0.37
NPAS3-209ENST00000551008 LIFP15018 202 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 ZNF28P17035 718 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 MSH3P20585 1137 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 MC4RP32245 332 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 GSDMDP57764 484 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 CYP4F2P78329 520 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 POU6F1Q14863 301 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 LONRF2Q1L5Z9 754 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 MANEAQ5SRI9 462 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 TMEM164Q5U3C3 297 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 CAPRIN2Q6IMN6 1127 aaKnown RBP12.74□□□□□ -0.37
NPAS3-209ENST00000551008 ZNF662Q6ZS27 426 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 PRSS42Q7Z5A4 293 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 SNX20Q7Z614 316 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 EXD3Q8N9H8 876 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 KLHL6Q8WZ60 621 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 CXorf40BQ96DE9 158 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 TTC25Q96NG3 672 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 PPP1R2P1Q96PQ5 205 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 RAB33BQ9H082 229 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 ZNF768Q9H5H4 540 aaKnown RBP12.74□□□□□ -0.37
NPAS3-209ENST00000551008 LRRC40Q9H9A6 602 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 ETNK1Q9HBU6 452 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 FAM8A1Q9UBU6 413 aa12.74□□□□□ -0.37
NPAS3-209ENST00000551008 TMEM184BQ9Y519 407 aaPredicted RBP12.74□□□□□ -0.37
NPAS3-209ENST00000551008 SEC16AO15027 2179 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 IGHV5-51A0A0C4DH38 117 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 OR51F1A6NGY5 319 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 ZNF189O75820 626 aaPredicted RBP12.73□□□□□ -0.37
NPAS3-209ENST00000551008 SUN1O94901 812 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 VCLP18206 1134 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 FOXN2P32314 431 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 PPM1FP49593 454 aaPredicted RBP12.73□□□□□ -0.37
NPAS3-209ENST00000551008 RAB15P59190 212 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 DBN1Q16643 649 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 P3H1Q32P28 736 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 CCDC38Q502W7 563 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 DCAF12Q5T6F0 453 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 CERS6Q6ZMG9 384 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 SERPINA9Q86WD7 417 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 RBM12BQ8IXT5 1001 aaKnown RBP12.73□□□□□ -0.37
NPAS3-209ENST00000551008 TXLNBQ8N3L3 684 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 OR52K1Q8NGK4 314 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 OR13J1Q8NGT2 312 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 CDKN2AIPNLQ96HQ2 116 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 ZNF514Q96K75 400 aaPredicted RBP12.73□□□□□ -0.37
NPAS3-209ENST00000551008 PPM1MQ96MI6 270 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 ZNF778Q96MU6 729 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 TLR10Q9BXR5 811 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 TSGA10Q9BZW7 698 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 WDR70Q9NW82 654 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 ZDHHC3Q9NYG2 299 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 SLC2A6Q9UGQ3 507 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 CRLS1Q9UJA2 301 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 PRSS21Q9Y6M0 314 aa12.73□□□□□ -0.37
NPAS3-209ENST00000551008 LOC101059948A0A1B0GTJ6 334 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 STK17BO94768 372 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 TIAF1O95411 115 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 ZSCAN5DPP0CG00 497 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 AMD1P17707 334 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 ITGALP20701 1170 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms