RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 DEPDC7Q96QD5 511 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 FOXP3Q9BZS1 431 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 ZMYND15Q9H091 742 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 WWP1Q9H0M0 922 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 VPS37BQ9H9H4 285 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 RDH14Q9HBH5 336 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 SARS2Q9NP81 518 aaKnown RBP13.47□□□□□ -0.25
TROAP-213ENST00000550709 WASH6PQ9NQA3 447 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 C20orf96Q9NUD7 363 aaPredicted RBP13.47□□□□□ -0.25
TROAP-213ENST00000550709 IMP3Q9NV31 184 aaKnown RBP13.47□□□□□ -0.25
TROAP-213ENST00000550709 PCDHB1Q9Y5F3 818 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 BPTFQ12830 3046 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 KNTC1P50748 2209 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 ZCWPW2A0A1B0GU75 182 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 UBA6A0AVT1 1052 aaPredicted RBP13.46□□□□□ -0.25
TROAP-213ENST00000550709 IQCF5A8MTL0 148 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 D6RAR5 112 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 NTN3O00634 580 aaPredicted RBP13.46□□□□□ -0.25
TROAP-213ENST00000550709 ZW10O43264 779 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 TUBB4AP04350 444 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 SLC35G4P0C7Q5 338 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 OR56A5P0C7T3 313 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 PGAM1P18669 254 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 XRCC1P18887 633 aaPredicted RBP13.46□□□□□ -0.25
TROAP-213ENST00000550709 CD1CP29017 333 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 GPR3P46089 330 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 CSE1LP55060 971 aaKnown RBP13.46□□□□□ -0.25
TROAP-213ENST00000550709 ARL4CP56559 192 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 SLC7A5Q01650 507 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 HIF1AQ16665 826 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 ISXQ2M1V0 245 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 MAP9Q49MG5 647 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 DUS1LQ6P1R4 473 aaKnown RBP13.46□□□□□ -0.25
TROAP-213ENST00000550709 XKR5Q6UX68 686 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 B3GNT8Q7Z7M8 397 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 TMEM135Q86UB9 458 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 UNC5BQ8IZJ1 945 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 WDR48Q8TAF3 677 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 JPH3Q8WXH2 748 aaPredicted RBP13.46□□□□□ -0.25
TROAP-213ENST00000550709 ELMO1Q92556 727 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 SH3KBP1Q96B97 665 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 CFAP36Q96G28 342 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 ATXN7L3BQ96GX2 97 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 AHCYL2Q96HN2 611 aaKnown RBP13.46□□□□□ -0.25
TROAP-213ENST00000550709 C12orf66Q96MD2 445 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 EBNA1BP2Q99848 306 aaKnown RBP13.46□□□□□ -0.25
TROAP-213ENST00000550709 TBC1D10AQ9BXI6 508 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 COG4Q9H9E3 785 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 ACSL5Q9ULC5 683 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 CHMP2BQ9UQN3 213 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 UTP11Q9Y3A2 253 aaKnown RBP13.46□□□□□ -0.25
TROAP-213ENST00000550709 LRP4O75096 1905 aa13.46□□□□□ -0.25
TROAP-213ENST00000550709 CEP295Q9C0D2 2601 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 SCN8AQ9UQD0 1980 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 IGHV1OR21-1A0A087WYE8 117 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 C17orf113A0A1B0GUU1 675 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 FAM221BA6H8Z2 402 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 KLHL33A6NCF5 533 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 TRABD2BA6NFA1 517 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 C1QTNF9BB2RNN3 333 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 SMAPO00193 183 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 QSOX1O00391 747 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 PRMT5O14744 637 aaPredicted RBP13.45□□□□□ -0.26
TROAP-213ENST00000550709 TP73O15350 636 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 TCEA3O75764 348 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 USP1O94782 785 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 FTH1P02794 183 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 C1QTNF9P0C862 333 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 MPSTP25325 297 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 PDHA2P29803 388 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 FMO4P31512 558 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 ELK3P41970 407 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 EIF3BP55884 814 aaKnown RBP13.45□□□□□ -0.26
TROAP-213ENST00000550709 CALCOCO2Q13137 446 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 BOP1Q14137 746 aaKnown RBP13.45□□□□□ -0.26
TROAP-213ENST00000550709 KRT33BQ14525 404 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 NR1D2Q14995 579 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 LONRF1Q17RB8 773 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 ARMC3Q5W041 872 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 DUPD1Q68J44 220 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 ZNF470Q6ECI4 717 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 PTRHD1Q6GMV3 140 aaKnown RBP13.45□□□□□ -0.26
TROAP-213ENST00000550709 TMEM26Q6ZUK4 368 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 TMPRSS9Q7Z410 1059 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 PIM3Q86V86 326 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 ANKMY2Q8IV38 441 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 KRT222Q8N1A0 295 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 AVL9Q8NBF6 648 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.45□□□□□ -0.26
TROAP-213ENST00000550709 OR10G6Q8NH81 332 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 LKAAEAR1Q8TD35 194 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 RMDN2Q96LZ7 410 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 INSM2Q96T92 566 aaPredicted RBP13.45□□□□□ -0.26
TROAP-213ENST00000550709 NUDT22Q9BRQ3 303 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 MRFAP1Q9Y605 127 aa13.45□□□□□ -0.26
TROAP-213ENST00000550709 F8W8V4 182 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 ERVK-10P10266 1014 aa13.44□□□□□ -0.26
TROAP-213ENST00000550709 MTHFD1P11586 935 aaKnown RBP13.44□□□□□ -0.26
TROAP-213ENST00000550709 HOXB3P14651 431 aaPredicted RBP13.44□□□□□ -0.26
TROAP-213ENST00000550709 TYRP1P17643 537 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms