RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 PDPRQ8NCN5 879 aa12.38□□□□□ -0.43
CACNB3-217ENST00000550483 GLMNQ92990 594 aa12.38□□□□□ -0.43
CACNB3-217ENST00000550483 SGF29Q96ES7 293 aa12.38□□□□□ -0.43
CACNB3-217ENST00000550483 TMEM237Q96Q45 408 aa12.38□□□□□ -0.43
CACNB3-217ENST00000550483 WRAP53Q9BUR4 548 aaKnown RBP12.38□□□□□ -0.43
CACNB3-217ENST00000550483 KCNK13Q9HB14 408 aa12.38□□□□□ -0.43
CACNB3-217ENST00000550483 FBRSL1Q9HCM7 1045 aaKnown RBP12.38□□□□□ -0.43
CACNB3-217ENST00000550483 TRIM39Q9HCM9 518 aa12.38□□□□□ -0.43
CACNB3-217ENST00000550483 SAR1AQ9NR31 198 aa12.38□□□□□ -0.43
CACNB3-217ENST00000550483 TXLNGQ9NUQ3 528 aa12.38□□□□□ -0.43
CACNB3-217ENST00000550483 LIMD1Q9UGP4 676 aa12.38□□□□□ -0.43
CACNB3-217ENST00000550483 CD84Q9UIB8 345 aa12.38□□□□□ -0.43
CACNB3-217ENST00000550483 GPR34Q9UPC5 381 aa12.38□□□□□ -0.43
CACNB3-217ENST00000550483 TRIM33Q9UPN9 1127 aa12.38□□□□□ -0.43
CACNB3-217ENST00000550483 PRSS21Q9Y6M0 314 aa12.38□□□□□ -0.43
CACNB3-217ENST00000550483 FAM186AA6NE01 2351 aa12.38□□□□□ -0.43
CACNB3-217ENST00000550483 DMDP11532 3685 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 C17orf113A0A1B0GUU1 675 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 NPEPPSL1A6NEC2 478 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 FADS2P1A8MWK0 482 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 MATN2O00339 956 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 GIPC1O14908 333 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 LIN7AO14910 233 aaPredicted RBP12.37□□□□□ -0.43
CACNB3-217ENST00000550483 PLRG1O43660 514 aaKnown RBP12.37□□□□□ -0.43
CACNB3-217ENST00000550483 LYPLA1O75608 230 aaPredicted RBP12.37□□□□□ -0.43
CACNB3-217ENST00000550483 SUPT7LO94864 414 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 KLF8O95600 359 aaPredicted RBP12.37□□□□□ -0.43
CACNB3-217ENST00000550483 EGFP01133 1207 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 SERPINA6P08185 405 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 RPS17P08708 135 aaKnown RBP12.37□□□□□ -0.43
CACNB3-217ENST00000550483 MTHFD2P13995 350 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 GM2AP17900 193 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 PGGT1BP53609 377 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 COPAP53621 1224 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 SEC13P55735 322 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 AP1S2P56377 157 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 TGFBIQ15582 683 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 PFKFB4Q16877 469 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 CES4AQ5XG92 561 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 SULT1C3Q6IMI6 304 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 ACAD11Q709F0 780 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 PNPLA1Q8N8W4 532 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 RFWD2Q8NHY2 731 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 FAM3CQ92520 227 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 EZH1Q92800 747 aaPredicted RBP12.37□□□□□ -0.43
CACNB3-217ENST00000550483 SKA1Q96BD8 255 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 LINC00615Q96LM1 132 aaPredicted RBP12.37□□□□□ -0.43
CACNB3-217ENST00000550483 RMDN2Q96LZ7 410 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 SLC30A3Q99726 388 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 CCT7Q99832 543 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 CCDC28BQ9BUN5 200 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 C20orf27Q9GZN8 174 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 HEBP1Q9NRV9 189 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 CD274Q9NZQ7 290 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 ZFP69BQ9UJL9 534 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 TMPRSS11EQ9UL52 423 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 ITM2BQ9Y287 266 aa12.37□□□□□ -0.43
CACNB3-217ENST00000550483 MRPS17Q9Y2R5 130 aaKnown RBP12.37□□□□□ -0.43
CACNB3-217ENST00000550483 DNMT3AQ9Y6K1 912 aaPredicted RBP12.37□□□□□ -0.43
CACNB3-217ENST00000550483 CACNA1GO43497 2377 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 IQCF5A8MTL0 148 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 UBXN8O00124 270 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 CDC7O00311 574 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 SLC22A2O15244 555 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 FFAR2O15552 330 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 MMP20O60882 483 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 RNASEH2AO75792 299 aaKnown RBP12.36□□□□□ -0.43
CACNB3-217ENST00000550483 FGF4P08620 206 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 HIST1H2AGP0C0S8 130 aaPredicted RBP12.36□□□□□ -0.43
CACNB3-217ENST00000550483 HIST1H2ADP20671 130 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 CYP2A7P20853 494 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 ADSLP30566 484 aaPredicted RBP12.36□□□□□ -0.43
CACNB3-217ENST00000550483 CCR7P32248 378 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 HNMTP50135 292 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 PRKCQQ04759 706 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 TCF15Q12870 199 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 TMEM115Q12893 351 aaPredicted RBP12.36□□□□□ -0.43
CACNB3-217ENST00000550483 LCP2Q13094 533 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 LRRC32Q14392 662 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 KRT72Q14CN4 511 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 PCBP2Q15366 365 aaKnown RBP eCLIP12.36□□□□□ -0.43
CACNB3-217ENST00000550483 GALNTL6Q49A17 601 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 SYTL3Q4VX76 610 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 C2orf27AQ580R0 203 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 ACSBG2Q5FVE4 666 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 SH2D4BQ5SQS7 431 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 EPGNQ6UW88 154 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 SBSNQ6UWP8 590 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.36□□□□□ -0.43
CACNB3-217ENST00000550483 RFLNAQ6ZTI6 216 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 CUZD1Q86UP6 607 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 TMPRSS6Q8IU80 811 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 ADHFE1Q8IWW8 467 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 AADATQ8N5Z0 425 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 FITM2Q8N6M3 262 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 ZNF781Q8N8C0 355 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 UBTD2Q8WUN7 234 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 TMEM159Q96B96 161 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 FAM136AQ96C01 138 aa12.36□□□□□ -0.43
CACNB3-217ENST00000550483 ERP27Q96DN0 273 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms