RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.96□□□□□ -0.66
LINC00661-204ENST00000549354 SLC8A2Q9UPR5 921 aa10.96□□□□□ -0.66
LINC00661-204ENST00000549354 A0A087WXM4 84 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 TCRBV3S1A0A5B6 114 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 DLGAP1O14490 977 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 ARPC2O15144 300 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 MUSKO15146 869 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 ZFC3H1O60293 1989 aaKnown RBP10.95□□□□□ -0.66
LINC00661-204ENST00000549354 LRATO95237 230 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 ITGADQ13349 1161 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 PYCR3Q53H96 274 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 SIRPB2Q5JXA9 342 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 ERMP1Q7Z2K6 904 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 DNAJB7Q7Z6W7 309 aaPredicted RBP10.95□□□□□ -0.66
LINC00661-204ENST00000549354 CAMK1DQ8IU85 385 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 LGI2Q8N0V4 545 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 PGBD5Q8N414 524 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 NINQ8N4C6 2090 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 CLP1Q92989 425 aaKnown RBP10.95□□□□□ -0.66
LINC00661-204ENST00000549354 MAELQ96JY0 434 aaKnown RBP10.95□□□□□ -0.66
LINC00661-204ENST00000549354 GPR21Q99679 349 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 SLC30A3Q99726 388 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 THUMPD3Q9BV44 507 aaKnown RBP10.95□□□□□ -0.66
LINC00661-204ENST00000549354 RNF38Q9H0F5 515 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 GSTO2Q9H4Y5 243 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 MRPL17Q9NRX2 175 aaKnown RBP10.95□□□□□ -0.66
LINC00661-204ENST00000549354 TMEM181Q9P2C4 612 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 CD300AQ9UGN4 299 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 INSL5Q9Y5Q6 135 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 LOC285095A0A1B0GVY8 99 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 H0Y626 953 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 H3BMQ9 156 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 NPHS1O60500 1241 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 GREM1O60565 184 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 CLASP2O75122 1294 aaKnown RBP10.95□□□□□ -0.66
LINC00661-204ENST00000549354 TRIM16O95361 564 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 ALDH3B2P48448 385 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 RPL26P61254 145 aaKnown RBP10.95□□□□□ -0.66
LINC00661-204ENST00000549354 CBX3Q13185 183 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 DGCR6Q14129 220 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 VEPH1Q14D04 833 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 SLC2A7Q6PXP3 512 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 GPR180Q86V85 440 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 COG8Q96MW5 612 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 TDRD1Q9BXT4 1180 aaKnown RBP10.95□□□□□ -0.66
LINC00661-204ENST00000549354 IL21Q9HBE4 155 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 WDR70Q9NW82 654 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 EIF2B4Q9UI10 523 aaKnown RBP10.95□□□□□ -0.66
LINC00661-204ENST00000549354 UTS2RQ9UKP6 389 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 ZNF510Q9Y2H8 683 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 CHD7Q9P2D1 2997 aa10.95□□□□□ -0.66
LINC00661-204ENST00000549354 E5RI56 91 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 NDUFS3O75489 264 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 CLDN11O75508 207 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 CDK14O94921 469 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 CTSAP10619 480 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 HOXD9P28356 352 aaPredicted RBP10.94□□□□□ -0.66
LINC00661-204ENST00000549354 POLR2IP36954 125 aaKnown RBP10.94□□□□□ -0.66
LINC00661-204ENST00000549354 C21orf59P57076 290 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 UGT3A2Q3SY77 523 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 POM121L1PQ3SYA9 428 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 PERM1Q5SV97 790 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 PPP4R4Q6NUP7 873 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 LILRA6Q6PI73 481 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 CCDC81Q6ZN84 652 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 LYSMD3Q7Z3D4 306 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 UBE2Q1Q7Z7E8 422 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 DNAJC5GQ8N7S2 189 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 C2CD4AQ8NCU7 369 aaPredicted RBP10.94□□□□□ -0.66
LINC00661-204ENST00000549354 OR52B6Q8NGF0 335 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 EGFL8Q99944 293 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 ANKRD60Q9BZ19 345 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 MEAF6Q9HAF1 191 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 HPS4Q9NQG7 708 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 IKZF3Q9UKT9 509 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 OBSL1O75147 1896 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 TEX28O15482 410 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 RSL1D1O76021 490 aaKnown RBP10.94□□□□□ -0.66
LINC00661-204ENST00000549354 OR4F21O95013 312 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 PAPSS2O95340 614 aaPredicted RBP10.94□□□□□ -0.66
LINC00661-204ENST00000549354 GLP2RO95838 553 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 EPOP01588 193 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 HSPA1AP0DMV8 641 aaKnown RBP10.94□□□□□ -0.66
LINC00661-204ENST00000549354 HSPA1BP0DMV9 641 aaKnown RBP10.94□□□□□ -0.66
LINC00661-204ENST00000549354 IL7RP16871 459 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 VARSP26640 1264 aaKnown RBP10.94□□□□□ -0.66
LINC00661-204ENST00000549354 POLD2P49005 469 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 EPHB3P54753 998 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 HMGCS1Q01581 520 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 POU4F1Q01851 419 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 PLD1Q13393 1074 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 INPP5AQ14642 412 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 MAPK11Q15759 364 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 UAP1L1Q3KQV9 507 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 UNC50Q53HI1 259 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 PAGE3Q5JUK9 113 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 ADGRF1Q5T601 910 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 LARP4Q71RC2 724 aaKnown RBP eCLIP10.94□□□□□ -0.66
LINC00661-204ENST00000549354 GALNT5Q7Z7M9 940 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 ISCA2Q86U28 154 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms