RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 RIMKLAQ8IXN7 391 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 NXPE1Q8N323 547 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 GOLGA6L1Q8N7Z2 621 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 IL17RCQ8NAC3 791 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 RNF214Q8ND24 703 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 LRRN4CLQ8ND94 238 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 MAGOHBQ96A72 148 aaKnown RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 FCRL3Q96P31 734 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 JAM3Q9BX67 310 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 SIK2Q9H0K1 926 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 GABARAPL1Q9H0R8 117 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 KCNK13Q9HB14 408 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 KLC4Q9NSK0 619 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 EHD3Q9NZN3 535 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 ANAPC5Q9UJX4 755 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 ENTPD2Q9Y5L3 495 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 TRIM64BA6NI03 449 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 ALDOAP04075 364 aaKnown RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 BPGMP07738 259 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 SLC35E2BP0CK96 405 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 FGF3P11487 239 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 MTHFD2P13995 350 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 RHCEP18577 417 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 DGKEP52429 567 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 PITX1P78337 314 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 HTRA3P83110 453 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 ZXDAP98168 799 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 RELBQ01201 579 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 RHDQ02161 417 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 TRAF2Q12933 501 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 GSTA3Q16772 222 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 C9orf50Q5SZB4 431 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 LGSNQ5TDP6 509 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 MARC1Q5VT66 337 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 ATG9BQ674R7 924 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 ZNF549Q6P9A3 640 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 DCUN1D2Q6PH85 259 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 FRMD7Q6ZUT3 714 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 SPATA19Q7Z5L4 167 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 KRT77Q7Z794 578 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 HPS6Q86YV9 775 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 SLC41A1Q8IVJ1 513 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 CENPLQ8N0S6 344 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 ZCCHC7Q8N3Z6 543 aaKnown RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 SCAMP5Q8TAC9 235 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 QRFPRQ96P65 431 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 SORT1Q99523 831 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 FAM204AQ9H8W3 233 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 DDIT4Q9NX09 232 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 ZSCAN32Q9NX65 697 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 ATP6V1HQ9UI12 483 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 PILRAQ9UKJ1 303 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 CYP8B1Q9UNU6 501 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 ATG2BQ96BY7 2078 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 PRODHO43272 600 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 PLIN3O60664 434 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 RSL1D1O76021 490 aaKnown RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 CTSLP07711 333 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 NME1P15531 152 aaKnown RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 CALRP27797 417 aaKnown RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 SPAM1P38567 509 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 GRIK1P39086 918 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 P2RY2P41231 377 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 NBL1P41271 181 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 CARSP49589 748 aaKnown RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 GZMMP51124 257 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 SGSHP51688 502 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 CUL3Q13618 768 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 ZNF267Q14586 743 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 TAF5Q15542 800 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 CYP4A22Q5TCH4 519 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 ZNF425Q6IV72 752 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 LLGL2Q6P1M3 1020 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 PGM2L1Q6PCE3 622 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 EPGNQ6UW88 154 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 PIWIL4Q7Z3Z4 852 aaKnown RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 CALHM3Q86XJ0 350 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 MAML2Q8IZL2 1156 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 ENDOVQ8N8Q3 282 aaKnown RBP4.81□□□□□ -1.64
SCAF11-212ENST00000549162 MDGA1Q8NFP4 955 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 UBA3Q8TBC4 463 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 BTN2A2Q8WVV5 523 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 ASB11Q8WXH4 323 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 STARD8Q92502 1023 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 EDAQ92838 391 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 TAAR9Q96RI9 348 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 C17orf80Q9BSJ5 609 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 NMRAL1Q9HBL8 299 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 PRSS16Q9NQE7 514 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 PKD2L1Q9P0L9 805 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 SLC25A13Q9UJS0 675 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 PCDHGA1Q9Y5H4 931 aa4.81□□□□□ -1.64
SCAF11-212ENST00000549162 GOLGA8TH3BQL2 631 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 SPOPO43791 374 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 PQBP1O60828 265 aaKnown RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 JAK1P23458 1154 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 SPRP35270 261 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 IGFALSP35858 605 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 MDH1P40925 334 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms