RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 BCL2L1Q07817 233 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 LSAMPQ13449 338 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 SPANXN4Q5MJ08 99 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 ZNF648Q5T619 568 aaPredicted RBP13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 CYP20A1Q6UW02 462 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 ARHGAP22Q7Z5H3 698 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 EPHX4Q8IUS5 362 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 APLFQ8IW19 511 aaPredicted RBP13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 TEX26Q8N6G2 289 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 SGCDQ92629 289 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 ZFRQ96KR1 1074 aaKnown RBP13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 DPY30Q9C005 99 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 DERL2Q9GZP9 239 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 ARMC7Q9H6L4 198 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 ZDHHC6Q9H6R6 413 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 PNPLA3Q9NST1 481 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 RSL24D1Q9UHA3 163 aaKnown RBP13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 LEF1Q9UJU2 399 aaPredicted RBP13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 TDRD15B5MCY1 1934 aaKnown RBP13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 UROSP10746 265 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 MYCLP1P12525 358 aaPredicted RBP13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 SELPP16109 830 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 IL7RP16871 459 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 INHBCP55103 352 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 GRM2Q14416 872 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 TBPL2Q6SJ96 375 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 SDCCAG3Q96C92 435 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 HSPBAP1Q96EW2 488 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 ZBTB18Q99592 522 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 HOPXQ9BPY8 73 aaPredicted RBP13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 MGME1Q9BQP7 344 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 PREBQ9HCU5 417 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 SDR39U1Q9NRG7 319 aaPredicted RBP13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 OLAHQ9NV23 265 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 OPTCQ9UBM4 332 aa13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 ZNF490Q9ULM2 529 aaPredicted RBP13.47□□□□□ -0.25
PRPF40B-209ENST00000548825 IGLV3-10A0A075B6K4 115 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 DRGXA6NNA5 263 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 WASH4PA8MWX3 477 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 SLC10A3P09131 477 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 OGNP20774 298 aaKnown RBP13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 AQP1P29972 269 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 ATP6V0D1P61421 351 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 FAM189BP81408 668 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 SPIDRQ14159 915 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 CHRNA6Q15825 494 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 MAPKAPK3Q16644 382 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 TCTN1Q2MV58 587 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 ARTNQ5T4W7 220 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 SEPT8Q92599 483 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 EID2BQ96D98 161 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 ZNF711Q9Y462 761 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 GPR45Q9Y5Y3 372 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 DOCK6Q96HP0 2047 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 TCRBV3S1A0A5B6 114 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 HS6ST1O60243 411 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 MLYCDO95822 493 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 NTRK1P04629 796 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 CHRNB3Q05901 458 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 VAC14Q08AM6 782 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 TRIM71Q2Q1W2 868 aaKnown RBP13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 XKR5Q6UX68 686 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 Q6ZSR9 355 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 TMEM26Q6ZUK4 368 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 DNAJB7Q7Z6W7 309 aaPredicted RBP13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 CHERPQ8IWX8 916 aaKnown RBP13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 LIX1Q8N485 282 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 BEND7Q8N7W2 519 aaPredicted RBP13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 PROKR1Q8TCW9 393 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 ROPN1LQ96C74 230 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 MYO19Q96H55 970 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 CASD1Q96PB1 797 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 MYOCQ99972 504 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 IRAK4Q9NWZ3 460 aa13.46□□□□□ -0.25
PRPF40B-209ENST00000548825 CHD7Q9P2D1 2997 aa13.46□□□□□ -0.26
PRPF40B-209ENST00000548825 LOC730098B7Z3J9 87 aa13.46□□□□□ -0.26
PRPF40B-209ENST00000548825 KDELR3O43731 214 aa13.46□□□□□ -0.26
PRPF40B-209ENST00000548825 ULK1O75385 1050 aa13.46□□□□□ -0.26
PRPF40B-209ENST00000548825 GLUD1P00367 558 aa13.46□□□□□ -0.26
PRPF40B-209ENST00000548825 UGT2B4P06133 528 aa13.46□□□□□ -0.26
PRPF40B-209ENST00000548825 C8BP07358 591 aa13.46□□□□□ -0.26
PRPF40B-209ENST00000548825 GABRR2P28476 465 aa13.46□□□□□ -0.26
PRPF40B-209ENST00000548825 CRY1Q16526 586 aa13.46□□□□□ -0.26
PRPF40B-209ENST00000548825 USP41Q3LFD5 358 aa13.46□□□□□ -0.26
PRPF40B-209ENST00000548825 KCTD21Q4G0X4 260 aa13.46□□□□□ -0.26
PRPF40B-209ENST00000548825 ENPP6Q6UWR7 440 aa13.46□□□□□ -0.26
PRPF40B-209ENST00000548825 BEND5Q7L4P6 421 aa13.46□□□□□ -0.26
PRPF40B-209ENST00000548825 ADGRG5Q8IZF4 528 aa13.46□□□□□ -0.26
PRPF40B-209ENST00000548825 FOXJ1Q92949 421 aa13.46□□□□□ -0.26
PRPF40B-209ENST00000548825 TMEM125Q96AQ2 219 aa13.46□□□□□ -0.26
PRPF40B-209ENST00000548825 ZNF599Q96NL3 588 aa13.46□□□□□ -0.26
PRPF40B-209ENST00000548825 DEFB118Q96PH6 123 aa13.46□□□□□ -0.26
PRPF40B-209ENST00000548825 PARVBQ9HBI1 364 aa13.46□□□□□ -0.26
PRPF40B-209ENST00000548825 DMTF1Q9Y222 760 aa13.46□□□□□ -0.26
PRPF40B-209ENST00000548825 INVSQ9Y283 1065 aa13.46□□□□□ -0.26
PRPF40B-209ENST00000548825 MYOFQ9NZM1 2061 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 OR2AG2A6NM03 316 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 H7C4K7 107 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 RAD51BO15315 384 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 KCNH1O95259 989 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms