RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 RARRES3Q9UL19 164 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 LUC7L2Q9Y383 392 aaKnown RBP8.31□□□□□ -1.08
TROAP-208ENST00000548817 HEY1Q9Y5J3 304 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 PCYT1BQ9Y5K3 369 aaPredicted RBP8.31□□□□□ -1.08
TROAP-208ENST00000548817 A0A1W2PQJ5 194 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 FAM221AA4D161 298 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 PPP1R12AO14974 1030 aaPredicted RBP8.3□□□□□ -1.08
TROAP-208ENST00000548817 CHUKO15111 745 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 H2AFZP0C0S5 128 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 PIRTP0C851 137 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 FGF5P12034 268 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 ZFXP17010 805 aaPredicted RBP8.3□□□□□ -1.08
TROAP-208ENST00000548817 LPOP22079 712 aaPredicted RBP8.3□□□□□ -1.08
TROAP-208ENST00000548817 KDELR1P24390 212 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 RPL10P27635 214 aaKnown RBP8.3□□□□□ -1.08
TROAP-208ENST00000548817 PTPN4P29074 926 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 CAPZBP47756 277 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 ARSEP51690 589 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 DCDC1P59894 354 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 SH3BP2P78314 561 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 IFI35P80217 286 aaPredicted RBP8.3□□□□□ -1.08
TROAP-208ENST00000548817 ZBED6P86452 979 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 ACY1Q03154 408 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 GBE1Q04446 702 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 NR1I3Q14994 352 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 PLCL1Q15111 1095 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 PDK1Q15118 436 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 PCSK7Q16549 785 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 PLEKHN1Q494U1 663 aaPredicted RBP8.3□□□□□ -1.08
TROAP-208ENST00000548817 CRB2Q5IJ48 1285 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 AGAP9Q5VTM2 703 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 HGSNATQ68CP4 663 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 ARMC6Q6NXE6 501 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 ABRAXAS1Q6UWZ7 409 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 WASH2PQ6VEQ5 465 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 FAM92BQ6ZTR7 304 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 H2AFVQ71UI9 128 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 PRSS42Q7Z5A4 293 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 BPHLQ86WA6 291 aaPredicted RBP8.3□□□□□ -1.08
TROAP-208ENST00000548817 TRAPPC5Q8IUR0 188 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 GPR26Q8NDV2 337 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 FDCSPQ8NFU4 85 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 LRRN4Q8WUT4 740 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 UBXN4Q92575 508 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 RNF31Q96EP0 1072 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 AGAP3Q96P47 875 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 FCRL4Q96PJ5 515 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 RNF157Q96PX1 679 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 NUDT9Q9BW91 350 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 TRIM8Q9BZR9 551 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 ZCCHC2Q9C0B9 1178 aaKnown RBP8.3□□□□□ -1.08
TROAP-208ENST00000548817 SLC40A1Q9NP59 571 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 WASH6PQ9NQA3 447 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 OGFRQ9NZT2 677 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 SCHIP1Q9P0W5 487 aaPredicted RBP8.3□□□□□ -1.08
TROAP-208ENST00000548817 ZNF624Q9P2J8 865 aaPredicted RBP8.3□□□□□ -1.08
TROAP-208ENST00000548817 SLC23A2Q9UGH3 650 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 ZNF711Q9Y462 761 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 SLC30A1Q9Y6M5 507 aa8.3□□□□□ -1.08
TROAP-208ENST00000548817 A0A087X0T9 212 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 UBA6A0AVT1 1052 aaPredicted RBP8.29□□□□□ -1.08
TROAP-208ENST00000548817 LRRD1A4D1F6 860 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 OR52A4PA6NMU1 304 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 APOL1O14791 398 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 MAP3K7O43318 606 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 KIF1CO43896 1103 aaKnown RBP8.29□□□□□ -1.08
TROAP-208ENST00000548817 MTX2O75431 263 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 MMP2P08253 660 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 STSP08842 583 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 FAM228BP0C875 321 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 NELFEP18615 380 aaKnown RBP8.29□□□□□ -1.08
TROAP-208ENST00000548817 PTGIRP43119 386 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 DRG2P55039 364 aaKnown RBP8.29□□□□□ -1.08
TROAP-208ENST00000548817 RRADP55042 308 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 UBASH3AP57075 661 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 PPIDQ08752 370 aaKnown RBP8.29□□□□□ -1.08
TROAP-208ENST00000548817 TMEM115Q12893 351 aaPredicted RBP8.29□□□□□ -1.08
TROAP-208ENST00000548817 TUBB3Q13509 450 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 GPR18Q14330 331 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 IHHQ14623 411 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 TMTC4Q5T4D3 741 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 VWA5B1Q5TIE3 1220 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 LYPLAL1Q5VWZ2 237 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 ZDHHC20Q5W0Z9 365 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 IGFL3Q6UXB1 125 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 BNC2Q6ZN30 1099 aaPredicted RBP8.29□□□□□ -1.08
TROAP-208ENST00000548817 BZW1Q7L1Q6 419 aaKnown RBP8.29□□□□□ -1.08
TROAP-208ENST00000548817 TMC3Q7Z5M5 1100 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 AMZ2Q86W34 360 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 NXPE1Q8N323 547 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 PQLC3Q8N755 202 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 TMEM102Q8N9M5 508 aaPredicted RBP8.29□□□□□ -1.08
TROAP-208ENST00000548817 KLHL6Q8WZ60 621 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 RSC1A1Q92681 617 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 FAF2Q96CS3 445 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 IMP4Q96G21 291 aaKnown RBP8.29□□□□□ -1.08
TROAP-208ENST00000548817 SLC25A51Q9H1U9 297 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 DEF6Q9H4E7 631 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.29□□□□□ -1.08
TROAP-208ENST00000548817 DTLQ9NZJ0 730 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms