RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 ZNF883P0CG24 379 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 NME1P15531 152 aaKnown RBP17.14■□□□□ 0.33
HDAC7-227ENST00000548080 ITGALP20701 1170 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 DGKAP23743 735 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 HTR1BP28222 390 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 CRHR1P34998 444 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 CA5AP35218 305 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 CCT5P48643 541 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 SRP54P61011 504 aaKnown RBP17.14■□□□□ 0.33
HDAC7-227ENST00000548080 POU4F1Q01851 419 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 GUCY1A3Q02108 690 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 RNF187Q5TA31 235 aaPredicted RBP17.14■□□□□ 0.33
HDAC7-227ENST00000548080 PSAPL1Q6NUJ1 521 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 ADAMTSL4Q6UY14 1074 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 CERS6Q6ZMG9 384 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 SNX20Q7Z614 316 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 CMC1Q7Z7K0 106 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 PIP4P1Q86T03 277 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 SLC25A45Q8N413 288 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 EID2Q8N6I1 236 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 OR56A4Q8NGH8 313 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 MGARPQ8TDB4 240 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 LMX1AQ8TE12 382 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 PLEKHG4BQ96PX9 1271 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 RTKNQ9BST9 563 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 SLC13A1Q9BZW2 595 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 ASB8Q9H765 288 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 CYP4F12Q9HCS2 524 aa17.14■□□□□ 0.33
HDAC7-227ENST00000548080 APOBEC3BQ9UH17 382 aaKnown RBP17.14■□□□□ 0.33
HDAC7-227ENST00000548080 CNOT6Q9ULM6 557 aaKnown RBP17.14■□□□□ 0.33
HDAC7-227ENST00000548080 ARID1BQ8NFD5 2236 aaPredicted RBP17.14■□□□□ 0.33
HDAC7-227ENST00000548080 RGSL1A5PLK6 1076 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 TOR1BO14657 336 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 TM9SF1O15321 606 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 PRAMEF1O95521 474 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 FUCA1P04066 466 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 SAT1P21673 171 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 CRABP2P29373 138 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 PPARGP37231 505 aaPredicted RBP17.13■□□□□ 0.33
HDAC7-227ENST00000548080 CSRP3P50461 194 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 SLC12A2P55011 1212 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 SLC14A1Q13336 389 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 NFATC2Q13469 925 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 CHRNA6Q15825 494 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 SEPT7Q16181 437 aaKnown RBP17.13■□□□□ 0.33
HDAC7-227ENST00000548080 GPR33Q49SQ1 333 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 PRRT3Q5FWE3 981 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 PPM1JQ5JR12 505 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 RBM20Q5T481 1227 aaKnown RBP17.13■□□□□ 0.33
HDAC7-227ENST00000548080 LYPLAL1Q5VWZ2 237 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 ZNF548Q8NEK5 533 aaPredicted RBP17.13■□□□□ 0.33
HDAC7-227ENST00000548080 ZNF398Q8TD17 642 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 TCP10LQ8TDR4 215 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 RHBDD1Q8TEB9 315 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 LPGAT1Q92604 370 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 TSPAN17Q96FV3 270 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 HIC2Q96JB3 615 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 TTC1Q99614 292 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 LRRC61Q9BV99 259 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 IQCGQ9H095 443 aaKnown RBP17.13■□□□□ 0.33
HDAC7-227ENST00000548080 VPS11Q9H270 941 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 DCDC2Q9UHG0 476 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 CRYL1Q9Y2S2 319 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 VWA7Q9Y334 891 aa17.13■□□□□ 0.33
HDAC7-227ENST00000548080 PLXNB3Q9ULL4 1909 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 A0A096LPK6 155 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 TRBV5-4A0A0C4DH59 114 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 PRSS38A1L453 326 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 PCDHGA12O60330 932 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 MTX2O75431 263 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 ASMTLO95671 621 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 C2P06681 752 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 CEACAM5P06731 702 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 STMN1P16949 149 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 UGT1A6P19224 532 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 UGT1A1P22309 533 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 UGT1A4P22310 534 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 UGT1A3P35503 534 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 UGT1A5P35504 534 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 NOVA1P51513 510 aaKnown RBP17.12■□□□□ 0.33
HDAC7-227ENST00000548080 HK3P52790 923 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 TAS2R39P59534 338 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 HNRNPKP61978 463 aaKnown RBP eCLIP17.12■□□□□ 0.335e-8■■■■□ 20.5
HDAC7-227ENST00000548080 PUM1Q14671 1186 aaKnown RBP eCLIP17.12■□□□□ 0.33
HDAC7-227ENST00000548080 SUZ12Q15022 739 aaKnown RBP17.12■□□□□ 0.33
HDAC7-227ENST00000548080 INSCQ1MX18 579 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 DEFB133Q30KQ1 61 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 HECTD2Q5U5R9 776 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 TTC19Q6DKK2 380 aaPredicted RBP17.12■□□□□ 0.33
HDAC7-227ENST00000548080 NDNQ99608 321 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 CLPBQ9H078 707 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 CDH19Q9H159 772 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 CARS2Q9HA77 564 aaKnown RBP17.12■□□□□ 0.33
HDAC7-227ENST00000548080 MLXIPLQ9NP71 852 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 TLK1Q9UKI8 766 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 PCOLCE2Q9UKZ9 415 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 TMPRSS11EQ9UL52 423 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 PRKAB1Q9Y478 270 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 PCYT1BQ9Y5K3 369 aaPredicted RBP17.12■□□□□ 0.33
HDAC7-227ENST00000548080 ZNF106Q9H2Y7 1883 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms