RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 AP1S1P61966 158 aa12.54□□□□□ -0.4
SCAF11-209ENST00000547018 SF1Q15637 639 aaKnown RBP12.54□□□□□ -0.4
SCAF11-209ENST00000547018 C5orf22Q49AR2 442 aa12.54□□□□□ -0.4
SCAF11-209ENST00000547018 ATP6AP1LQ52LC2 224 aa12.54□□□□□ -0.4
SCAF11-209ENST00000547018 CCDC149Q6ZUS6 474 aa12.54□□□□□ -0.4
SCAF11-209ENST00000547018 RBFAQ8N0V3 343 aa12.54□□□□□ -0.4
SCAF11-209ENST00000547018 TUBGCP5Q96RT8 1024 aa12.54□□□□□ -0.4
SCAF11-209ENST00000547018 COPS8Q99627 209 aa12.54□□□□□ -0.4
SCAF11-209ENST00000547018 EMILIN2Q9BXX0 1053 aa12.54□□□□□ -0.4
SCAF11-209ENST00000547018 ACTR8Q9H981 624 aa12.54□□□□□ -0.4
SCAF11-209ENST00000547018 PFDN4Q9NQP4 134 aa12.54□□□□□ -0.4
SCAF11-209ENST00000547018 PCTPQ9UKL6 214 aa12.54□□□□□ -0.4
SCAF11-209ENST00000547018 PRKAB1Q9Y478 270 aa12.54□□□□□ -0.4
SCAF11-209ENST00000547018 OAS3Q9Y6K5 1087 aaKnown RBP12.54□□□□□ -0.4
SCAF11-209ENST00000547018 KANSL1LA0AUZ9 987 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 MAP3K13O43283 966 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 LEFTY1O75610 366 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 RNASEH2AO75792 299 aaKnown RBP12.53□□□□□ -0.4
SCAF11-209ENST00000547018 ATP5BP06576 529 aaKnown RBP12.53□□□□□ -0.4
SCAF11-209ENST00000547018 MED21Q13503 144 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 GTF2H2Q13888 395 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 ABRAXAS2Q15018 415 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 AP5B1Q2VPB7 878 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 GTF2H2CQ6P1K8 395 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 SLC2A7Q6PXP3 512 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 ANKRD46Q86W74 232 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 LILRA2Q8N149 483 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 ITFG1Q8TB96 612 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 ACDQ96AP0 544 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 TCF12Q99081 682 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 SPAG4Q9NPE6 437 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 TRANK1O15050 2925 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 RNASEH1O60930 286 aaKnown RBP12.53□□□□□ -0.4
SCAF11-209ENST00000547018 SEC22BO75396 215 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 POLR2EP19388 210 aaKnown RBP12.53□□□□□ -0.4
SCAF11-209ENST00000547018 SPAM1P38567 509 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 TMC8Q8IU68 726 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 ZBTB2Q8N680 514 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 L3HYPDHQ96EM0 354 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 MED8Q96G25 268 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 DCUN1D1Q96GG9 259 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 INTS7Q9NVH2 962 aaKnown RBP12.53□□□□□ -0.4
SCAF11-209ENST00000547018 VPS9D1Q9Y2B5 631 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 ANAPC1Q9H1A4 1944 aa12.53□□□□□ -0.4
SCAF11-209ENST00000547018 G6PDP11413 515 aa12.52□□□□□ -0.4
SCAF11-209ENST00000547018 NNMTP40261 264 aa12.52□□□□□ -0.4
SCAF11-209ENST00000547018 PREPP48147 710 aa12.52□□□□□ -0.4
SCAF11-209ENST00000547018 CLCN7P51798 805 aa12.52□□□□□ -0.4
SCAF11-209ENST00000547018 MTPNP58546 118 aa12.52□□□□□ -0.4
SCAF11-209ENST00000547018 PAGE3Q5JUK9 113 aa12.52□□□□□ -0.4
SCAF11-209ENST00000547018 USP45Q70EL2 814 aa12.52□□□□□ -0.4
SCAF11-209ENST00000547018 GOLGA7Q7Z5G4 137 aa12.52□□□□□ -0.4
SCAF11-209ENST00000547018 VRK3Q8IV63 474 aa12.52□□□□□ -0.4
SCAF11-209ENST00000547018 CMTR2Q8IYT2 770 aaKnown RBP12.52□□□□□ -0.4
SCAF11-209ENST00000547018 CANT1Q8WVQ1 401 aa12.52□□□□□ -0.4
SCAF11-209ENST00000547018 KCNJ9Q92806 393 aa12.52□□□□□ -0.4
SCAF11-209ENST00000547018 IRF7Q92985 503 aa12.52□□□□□ -0.4
SCAF11-209ENST00000547018 TRMOQ9BU70 441 aa12.52□□□□□ -0.4
SCAF11-209ENST00000547018 CFHR5Q9BXR6 569 aa12.52□□□□□ -0.4
SCAF11-209ENST00000547018 FAM126AQ9BYI3 521 aaPredicted RBP12.52□□□□□ -0.4
SCAF11-209ENST00000547018 MAGEE1Q9HCI5 957 aa12.52□□□□□ -0.4
SCAF11-209ENST00000547018 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.52□□□□□ -0.4
SCAF11-209ENST00000547018 OPTCQ9UBM4 332 aa12.52□□□□□ -0.4
SCAF11-209ENST00000547018 RPL26L1Q9UNX3 145 aaKnown RBP12.52□□□□□ -0.4
SCAF11-209ENST00000547018 INSL6Q9Y581 213 aa12.52□□□□□ -0.4
SCAF11-209ENST00000547018 LOC730098B7Z3J9 87 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 PDLIM1O00151 329 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 RAD51BO15315 384 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 ZNF821O75541 412 aaPredicted RBP12.52□□□□□ -0.41
SCAF11-209ENST00000547018 PARNO95453 639 aaKnown RBP12.52□□□□□ -0.41
SCAF11-209ENST00000547018 B3GALT4O96024 378 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 GCKP35557 465 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 ACOX1Q15067 660 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 SLC14A2Q15849 920 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 RFTN2Q52LD8 501 aaPredicted RBP12.52□□□□□ -0.41
SCAF11-209ENST00000547018 Q6ZNB5 142 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 SNX20Q7Z614 316 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 PELI3Q8N2H9 469 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 PCYOX1LQ8NBM8 494 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 ELMO1Q92556 727 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 ELOVL2Q9NXB9 296 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 THEGQ9P2T0 379 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 GNPTGQ9UJJ9 305 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 DHRS7Q9Y394 339 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 H3BNX3 289 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 ESRRBO95718 433 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 RPIAP49247 311 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 POLE2P56282 527 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 PTSQ03393 145 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 GRIN2CQ14957 1233 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 MAPRE2Q15555 327 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 TMEM215Q68D42 235 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 ALG1LQ6GMV1 187 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 KBTBD6Q86V97 674 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 FIBINQ8TAL6 211 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 TSSK3Q96PN8 268 aa12.52□□□□□ -0.41
SCAF11-209ENST00000547018 RIOK2Q9BVS4 552 aaKnown RBP12.52□□□□□ -0.41
SCAF11-209ENST00000547018 CCDC154A6NI56 674 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 TRIM38O00635 465 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 ACADSP16219 412 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms