RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 PIP4K2CQ8TBX8 421 aa11.77□□□□□ -0.53
CCDC38-202ENST00000546386 ELMO1Q92556 727 aa11.77□□□□□ -0.53
CCDC38-202ENST00000546386 INPP5DQ92835 1189 aa11.77□□□□□ -0.53
CCDC38-202ENST00000546386 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.77□□□□□ -0.53
CCDC38-202ENST00000546386 TCF12Q99081 682 aa11.77□□□□□ -0.53
CCDC38-202ENST00000546386 OSBPL6Q9BZF3 934 aa11.77□□□□□ -0.53
CCDC38-202ENST00000546386 TM7SF3Q9NS93 570 aa11.77□□□□□ -0.53
CCDC38-202ENST00000546386 SUN2Q9UH99 717 aa11.77□□□□□ -0.53
CCDC38-202ENST00000546386 APPL1Q9UKG1 709 aa11.77□□□□□ -0.53
CCDC38-202ENST00000546386 KIF26AQ9ULI4 1882 aaPredicted RBP11.77□□□□□ -0.53
CCDC38-202ENST00000546386 E2F3O00716 465 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 TAPBPO15533 448 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 TSPAN6O43657 245 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 ANP32DO95626 131 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 RB1P06400 928 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 CAPN1P07384 714 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 ALOX15P16050 662 aaPredicted RBP11.76□□□□□ -0.53
CCDC38-202ENST00000546386 FCARP24071 287 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 SUOXP51687 545 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 MMEL1Q495T6 779 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 AARS2Q5JTZ9 985 aaKnown RBP11.76□□□□□ -0.53
CCDC38-202ENST00000546386 ANKS6Q68DC2 871 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 GRAMD4Q6IC98 578 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 ADNP2Q6IQ32 1131 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 TXNDC11Q6PKC3 985 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 SLC26A7Q8TE54 656 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 ARRDC3Q96B67 414 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 AP2M1Q96CW1 435 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 FAM83CQ9BQN1 747 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 TFB2MQ9H5Q4 396 aaKnown RBP11.76□□□□□ -0.53
CCDC38-202ENST00000546386 IPPKQ9H8X2 491 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 EML4Q9HC35 981 aaKnown RBP11.76□□□□□ -0.53
CCDC38-202ENST00000546386 ARL15Q9NXU5 204 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 SLAMF8Q9P0V8 285 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 PCTPQ9UKL6 214 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 PSMD13Q9UNM6 376 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 H7C0S8 307 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 NR5A2O00482 541 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 NPHS1O60500 1241 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 DNAJA2O60884 412 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 ATP5HO75947 161 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 PPARGP37231 505 aaPredicted RBP11.76□□□□□ -0.53
CCDC38-202ENST00000546386 SKIV2L2P42285 1042 aaKnown RBP11.76□□□□□ -0.53
CCDC38-202ENST00000546386 POLD2P49005 469 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 DNAJB13P59910 316 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 CYLC2Q14093 348 aaPredicted RBP11.76□□□□□ -0.53
CCDC38-202ENST00000546386 C9orf64Q5T6V5 341 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 IL27RAQ6UWB1 636 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 SLC22A9Q8IVM8 553 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 LMNTD2Q8IXW0 634 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 NKAPQ8N5F7 415 aaKnown RBP11.76□□□□□ -0.53
CCDC38-202ENST00000546386 FRMD1Q8N878 549 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 FLCNQ8NFG4 579 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 OR4F6Q8NGB9 312 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 CEP70Q8NHQ1 597 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 METTL6Q8TCB7 284 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 PEX13Q92968 403 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 PCDHAC1Q9H158 963 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 OR2AG1Q9H205 316 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 POLG2Q9UHN1 485 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 GNPTGQ9UJJ9 305 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 RNF11Q9Y3C5 154 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 COL4A3Q01955 1670 aa11.76□□□□□ -0.53
CCDC38-202ENST00000546386 F8W8V4 182 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 TBX10O75333 385 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 RPL10P27635 214 aaKnown RBP11.75□□□□□ -0.53
CCDC38-202ENST00000546386 FASTKQ14296 549 aaKnown RBP11.75□□□□□ -0.53
CCDC38-202ENST00000546386 ZNF805Q5CZA5 627 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 KIAA1211LQ6NV74 962 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.75□□□□□ -0.53
CCDC38-202ENST00000546386 ETFBKMTQ8IXQ9 262 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 GPR65Q8IYL9 337 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 DSELQ8IZU8 1212 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 MYO1HQ8N1T3 1032 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 GANCQ8TET4 914 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 P2RY13Q9BPV8 354 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 FZD3Q9NPG1 666 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 WWOXQ9NZC7 414 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 ADA2Q9NZK5 511 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 MSRAQ9UJ68 235 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 RWDD3Q9Y3V2 267 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 PFDN6O15212 129 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 SPINT1O43278 529 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 RECQL5O94762 991 aaPredicted RBP11.75□□□□□ -0.53
CCDC38-202ENST00000546386 PCDH8O95206 1070 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 B3GALT4O96024 378 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 DDX6P26196 483 aaKnown RBP eCLIP11.75□□□□□ -0.53
CCDC38-202ENST00000546386 OPRD1P41143 372 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 RPIAP49247 311 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 TFF2Q03403 129 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 LCP2Q13094 533 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 ABRAXAS2Q15018 415 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 CRY1Q16526 586 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 RAET1GQ6H3X3 334 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 LIPIQ6XZB0 460 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 GOLGA7Q7Z5G4 137 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 YAF2Q8IY57 180 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 RASGEF1AQ8N9B8 481 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 GFM2Q969S9 779 aaKnown RBP11.75□□□□□ -0.53
CCDC38-202ENST00000546386 CMTM5Q96DZ9 223 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms