RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 CCM2Q9BSQ5 444 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 ADNPQ9H2P0 1102 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 ARNT2Q9HBZ2 717 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 APMAPQ9HDC9 416 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 PDE7BQ9NP56 450 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 IMP3Q9NV31 184 aaKnown RBP9.17□□□□□ -0.94
YBX3-218ENST00000546298 GEMIN8Q9NWZ8 242 aaKnown RBP9.17□□□□□ -0.94
YBX3-218ENST00000546298 SIDT1Q9NXL6 827 aaKnown RBP9.17□□□□□ -0.94
YBX3-218ENST00000546298 IMPACTQ9P2X3 320 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 FKBPLQ9UIM3 349 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 WDR37Q9Y2I8 494 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 COLEC10Q9Y6Z7 277 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 ZZEF1O43149 2961 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 KIF26BQ2KJY2 2108 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 ANKRD36A6QL64 1941 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 SLC28A2O43868 658 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 DLGAP3O95886 979 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 MT-ND3P03897 115 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 SLC35G4P0C7Q5 338 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 FAM87AP0C7U9 286 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 CCNYL3P0C7X3 344 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 MTHFD1P11586 935 aaKnown RBP9.16□□□□□ -0.94
YBX3-218ENST00000546298 FGF5P12034 268 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 NELFEP18615 380 aaKnown RBP9.16□□□□□ -0.94
YBX3-218ENST00000546298 PBLDP30039 288 aaPredicted RBP9.16□□□□□ -0.94
YBX3-218ENST00000546298 CYP4F2P78329 520 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 XIAPP98170 497 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 ACY1Q03154 408 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 NFATC3Q12968 1075 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 KRT33BQ14525 404 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 GSE1Q14687 1217 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 PTPRCAPQ14761 206 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.16□□□□□ -0.94
YBX3-218ENST00000546298 CRTC2Q53ET0 693 aaPredicted RBP9.16□□□□□ -0.94
YBX3-218ENST00000546298 C6orf15Q6UXA7 325 aaPredicted RBP9.16□□□□□ -0.94
YBX3-218ENST00000546298 FAM83HQ6ZRV2 1179 aaPredicted RBP9.16□□□□□ -0.94
YBX3-218ENST00000546298 FAM92BQ6ZTR7 304 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 DET1Q7L5Y6 550 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 TIPARPQ7Z3E1 657 aaKnown RBP9.16□□□□□ -0.94
YBX3-218ENST00000546298 OOSP2Q86WS3 158 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 PPP1R3BQ86XI6 285 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 CARFQ8N187 725 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 NXPE1Q8N323 547 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 RNF10Q8N5U6 811 aaKnown RBP9.16□□□□□ -0.94
YBX3-218ENST00000546298 FAM71DQ8N9W8 422 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 SIDT2Q8NBJ9 832 aaKnown RBP9.16□□□□□ -0.94
YBX3-218ENST00000546298 RSC1A1Q92681 617 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 C12orf66Q96MD2 445 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 FCRL4Q96PJ5 515 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 OR6C1Q96RD1 312 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 FAM118BQ9BPY3 351 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 GORASP1Q9BQQ3 440 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 ULBP3Q9BZM4 244 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 LRRC40Q9H9A6 602 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 VPS37BQ9H9H4 285 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 STARD5Q9NSY2 213 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 SEMA5BQ9P283 1151 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 RARRES3Q9UL19 164 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 PSMD13Q9UNM6 376 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 KCTD3Q9Y597 815 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 PCDHB3Q9Y5E6 796 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 HEBP2Q9Y5Z4 205 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 RPS6KL1Q9Y6S9 549 aa9.16□□□□□ -0.94
YBX3-218ENST00000546298 DSPP15924 2871 aaKnown RBP9.16□□□□□ -0.94
YBX3-218ENST00000546298 SHROOM3Q8TF72 1996 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 LOC101059948A0A1B0GTJ6 334 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 C17orf113A0A1B0GUU1 675 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 UBA6A0AVT1 1052 aaPredicted RBP9.15□□□□□ -0.94
YBX3-218ENST00000546298 AGAP14A8MT82 685 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 NKX2-8O15522 239 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 GPR39O43194 453 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 KIF1CO43896 1103 aaKnown RBP9.15□□□□□ -0.94
YBX3-218ENST00000546298 GAS8O95995 478 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 POLBP06746 335 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 GSTM1P09488 218 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 ATP1B2P14415 290 aaPredicted RBP9.15□□□□□ -0.94
YBX3-218ENST00000546298 TCN2P20062 427 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 CDC25BP30305 580 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 STIP1P31948 543 aaKnown RBP9.15□□□□□ -0.94
YBX3-218ENST00000546298 STAT5AP42229 794 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 PRLHRP49683 370 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 ZNF140P52738 457 aaPredicted RBP9.15□□□□□ -0.94
YBX3-218ENST00000546298 SH3BP2P78314 561 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 TMPRSS15P98073 1019 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 GSTM4Q03013 218 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 PRKAA1Q13131 559 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 MSLNQ13421 630 aaPredicted RBP9.15□□□□□ -0.94
YBX3-218ENST00000546298 LAMB3Q13751 1172 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 SPARCL1Q14515 664 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 DNTTIP2Q5QJE6 756 aaKnown RBP9.15□□□□□ -0.94
YBX3-218ENST00000546298 TMTC4Q5T4D3 741 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 DENND5AQ6IQ26 1287 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 AADACL2Q6P093 401 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 ATG14Q6ZNE5 492 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 TAS2R42Q7RTR8 314 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 LINC00523Q86TU6 105 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 KLHDC8BQ8IXV7 354 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 CFAP206Q8IYR0 622 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 OR13C4Q8NGS5 318 aa9.15□□□□□ -0.94
YBX3-218ENST00000546298 HM13Q8TCT9 377 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms