RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 LCN10Q6JVE6 187 aa16.27■□□□□ 0.2
CPSF7-225ENST00000545934 DSELQ8IZU8 1212 aa16.27■□□□□ 0.2
CPSF7-225ENST00000545934 DDHD1Q8NEL9 900 aa16.27■□□□□ 0.2
CPSF7-225ENST00000545934 FDCSPQ8NFU4 85 aa16.27■□□□□ 0.2
CPSF7-225ENST00000545934 ZFPM2Q8WW38 1151 aa16.27■□□□□ 0.2
CPSF7-225ENST00000545934 MR1Q95460 341 aa16.27■□□□□ 0.2
CPSF7-225ENST00000545934 TRABDQ9H4I3 376 aa16.27■□□□□ 0.2
CPSF7-225ENST00000545934 HRASLS2Q9NWW9 162 aa16.27■□□□□ 0.2
CPSF7-225ENST00000545934 IL17CQ9P0M4 197 aa16.27■□□□□ 0.2
CPSF7-225ENST00000545934 CAPN11Q9UMQ6 739 aa16.27■□□□□ 0.2
CPSF7-225ENST00000545934 ANKRD12Q6UB98 2062 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 SEC16AO15027 2179 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 UBA6A0AVT1 1052 aaPredicted RBP16.26■□□□□ 0.19
CPSF7-225ENST00000545934 GAPDHSO14556 408 aaPredicted RBP16.26■□□□□ 0.19
CPSF7-225ENST00000545934 GPR39O43194 453 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 DPM1O60762 260 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 TMEM63AO94886 807 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 GSDMDP57764 484 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 MRPL49Q13405 166 aaKnown RBP16.26■□□□□ 0.19
CPSF7-225ENST00000545934 PLCL1Q15111 1095 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 PDK1Q15118 436 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 NFKBIBQ15653 356 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 TEX44Q53QW1 395 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 ZNF789Q5FWF6 425 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 LDLRAP1Q5SW96 308 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 SLC6A19Q695T7 634 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 KDELC1Q6UW63 502 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 NPNTQ6UXI9 565 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 TMEM126BQ8IUX1 230 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 RBMXL3Q8N7X1 1067 aaKnown RBP16.26■□□□□ 0.19
CPSF7-225ENST00000545934 GLIS1Q8NBF1 620 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 GDAP1Q8TB36 358 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 PNPLA2Q96AD5 504 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 TEKT5Q96M29 485 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 TTC25Q96NG3 672 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 INSM2Q96T92 566 aaPredicted RBP16.26■□□□□ 0.19
CPSF7-225ENST00000545934 NUDT9Q9BW91 350 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 NLNQ9BYT8 704 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 ZCCHC2Q9C0B9 1178 aaKnown RBP16.26■□□□□ 0.19
CPSF7-225ENST00000545934 SMOXQ9NWM0 555 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.26■□□□□ 0.19
CPSF7-225ENST00000545934 TMEM63CQ9P1W3 806 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 CTTNBP2NLQ9P2B4 639 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 SLC24A2Q9UI40 661 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 TCFL5Q9UL49 500 aa16.26■□□□□ 0.19
CPSF7-225ENST00000545934 NOTCH2Q04721 2471 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 DOPEY1Q5JWR5 2465 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 A0A0A6YYK5 440 aaPredicted RBP16.25■□□□□ 0.19
CPSF7-225ENST00000545934 A1L4Q6 167 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 MEN1O00255 615 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 APOL1O14791 398 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 PPP1R12AO14974 1030 aaPredicted RBP16.25■□□□□ 0.19
CPSF7-225ENST00000545934 UGT1A9O60656 530 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 PMPCBO75439 489 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 MBD3O95983 291 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 H2AFZP0C0S5 128 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 UGT1A6P19224 532 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 UGT1A1P22309 533 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 UGT1A4P22310 534 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 CD68P34810 354 aaPredicted RBP16.25■□□□□ 0.19
CPSF7-225ENST00000545934 SPAM1P38567 509 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 ARL4DP49703 201 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 KPNA2P52292 529 aaKnown RBP16.25■□□□□ 0.19
CPSF7-225ENST00000545934 ITGA1P56199 1179 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 ABRQ12979 859 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 NOMO1Q15155 1222 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 EIF2S3LQ2VIR3 472 aaKnown RBP16.25■□□□□ 0.19
CPSF7-225ENST00000545934 GPRC6AQ5T6X5 926 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 ZDHHC20Q5W0Z9 365 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 CCDC70Q6NSX1 233 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 DUS1LQ6P1R4 473 aaKnown RBP16.25■□□□□ 0.19
CPSF7-225ENST00000545934 TMEM220Q6QAJ8 160 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 H2AFVQ71UI9 128 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 OOSP2Q86WS3 158 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 ENDOVQ8N8Q3 282 aaKnown RBP16.25■□□□□ 0.19
CPSF7-225ENST00000545934 PPM1MQ96MI6 270 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 GBP4Q96PP9 640 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 SMAD5Q99717 465 aaKnown RBP16.25■□□□□ 0.19
CPSF7-225ENST00000545934 PACSIN1Q9BY11 444 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 UGT1A7Q9HAW7 530 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 UGT1A10Q9HAW8 530 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 UGT1A8Q9HAW9 530 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 IMP3Q9NV31 184 aaKnown RBP16.25■□□□□ 0.19
CPSF7-225ENST00000545934 UBP1Q9NZI7 540 aa16.25■□□□□ 0.19
CPSF7-225ENST00000545934 SNRNP200O75643 2136 aaKnown RBP16.24■□□□□ 0.19
CPSF7-225ENST00000545934 LRRD1A4D1F6 860 aa16.24■□□□□ 0.19
CPSF7-225ENST00000545934 OR2AG2A6NM03 316 aa16.24■□□□□ 0.19
CPSF7-225ENST00000545934 CLDN1O95832 211 aa16.24■□□□□ 0.19
CPSF7-225ENST00000545934 SERPINC1P01008 464 aa16.24■□□□□ 0.19
CPSF7-225ENST00000545934 EPOP01588 193 aa16.24■□□□□ 0.19
CPSF7-225ENST00000545934 KLK3P07288 261 aaPredicted RBP16.24■□□□□ 0.19
CPSF7-225ENST00000545934 MSL3P1P0C860 447 aa16.24■□□□□ 0.19
CPSF7-225ENST00000545934 PTPN3P26045 913 aa16.24■□□□□ 0.19
CPSF7-225ENST00000545934 VARSP26640 1264 aaKnown RBP16.24■□□□□ 0.19
CPSF7-225ENST00000545934 VAV2P52735 878 aa16.24■□□□□ 0.19
CPSF7-225ENST00000545934 PRKD1Q15139 912 aaPredicted RBP16.24■□□□□ 0.19
CPSF7-225ENST00000545934 SIRPB2Q5JXA9 342 aa16.24■□□□□ 0.19
CPSF7-225ENST00000545934 TMTC4Q5T4D3 741 aa16.24■□□□□ 0.19
CPSF7-225ENST00000545934 PRAMEF17Q5VTA0 474 aa16.24■□□□□ 0.19
CPSF7-225ENST00000545934 FAM198BQ6UWH4 519 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms