RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 ADAMTS15Q8TE58 950 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 HEPHQ9BQS7 1158 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 EIF2B4Q9UI10 523 aaKnown RBP12.37□□□□□ -0.43
COL4A6-209ENST00000545689 COLEC10Q9Y6Z7 277 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 NDUFS2O75306 463 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 AOC1P19801 751 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 IDSP22304 550 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 PRKCHP24723 683 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 LARS2Q15031 903 aaKnown RBP12.37□□□□□ -0.43
COL4A6-209ENST00000545689 SLC39A4Q6P5W5 647 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 AHI1Q8N157 1196 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 FAM210AQ96ND0 272 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 ZIM2Q9NZV7 527 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 PDE10AQ9Y233 779 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 H0Y858 1186 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 CDK14O94921 469 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 ZNF132P52740 706 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 AQP4P55087 323 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 RPS14P62263 151 aaKnown RBP12.37□□□□□ -0.43
COL4A6-209ENST00000545689 HKDC1Q2TB90 917 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 DEFB115Q30KQ5 88 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 SLC9B1Q4ZJI4 515 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 MSANTD2Q6P1R3 559 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 OLFML1Q6UWY5 402 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 OAFQ86UD1 273 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 AKAP14Q86UN6 197 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 DEC1Q9P2X7 70 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 ERVW-1Q9UQF0 538 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 LRP6O75581 1613 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 KLRG2A4D1S0 409 aaPredicted RBP12.37□□□□□ -0.43
COL4A6-209ENST00000545689 HSD17B2P37059 387 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 HNMTP50135 292 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 CYP4F2P78329 520 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 NAE1Q13564 534 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 KIAA1324Q6UXG2 1013 aaKnown RBP12.37□□□□□ -0.43
COL4A6-209ENST00000545689 SLC34A3Q8N130 599 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 UXS1Q8NBZ7 420 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 NODALQ96S42 347 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 IGFLR1Q9H665 355 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 RPRD1BQ9NQG5 326 aaKnown RBP12.37□□□□□ -0.43
COL4A6-209ENST00000545689 POLR3BQ9NW08 1133 aaPredicted RBP12.37□□□□□ -0.43
COL4A6-209ENST00000545689 THUMPD1Q9NXG2 353 aaKnown RBP12.37□□□□□ -0.43
COL4A6-209ENST00000545689 ING3Q9NXR8 418 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 ASB3Q9Y575 518 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 STON1Q9Y6Q2 735 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 CHD2O14647 1828 aaKnown RBP12.37□□□□□ -0.43
COL4A6-209ENST00000545689 NT5C1B-RDH14C9J2C7 533 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 CCNB2O95067 398 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 CHIT1Q13231 466 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 KCTD19Q17RG1 926 aaPredicted RBP12.37□□□□□ -0.43
COL4A6-209ENST00000545689 POM121L1PQ3SYA9 428 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 ACSBG2Q5FVE4 666 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 DCST1Q5T197 706 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 SH3PXD2AQ5TCZ1 1133 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 LDB1Q86U70 411 aaPredicted RBP12.37□□□□□ -0.43
COL4A6-209ENST00000545689 SCAIQ8N9R8 606 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 CLEC4CQ8WTT0 213 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 SLC35F5Q8WV83 523 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 NSMCE3Q96MG7 304 aa12.37□□□□□ -0.43
COL4A6-209ENST00000545689 LOC110117498-PIK3R3F6TDL0 507 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 SCAMP3O14828 347 aaKnown RBP12.36□□□□□ -0.43
COL4A6-209ENST00000545689 GPX6P59796 221 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 SLC35G1Q2M3R5 365 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 P2RY8Q86VZ1 359 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 CHPFQ8IZ52 775 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 RAB2BQ8WUD1 216 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 SUSD3Q96L08 255 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 COQ7Q99807 217 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 TCF25Q9BQ70 676 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 MBD2Q9UBB5 411 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 RBPJLQ9UBG7 517 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 PEX16Q9Y5Y5 336 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 PRMT2P55345 433 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 IFI44LQ53G44 452 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 RBM48Q5RL73 367 aaKnown RBP12.36□□□□□ -0.43
COL4A6-209ENST00000545689 ZNF697Q5TEC3 545 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 LIN54Q6MZP7 749 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 TMC8Q8IU68 726 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 SAMD14Q8IZD0 417 aaPredicted RBP12.36□□□□□ -0.43
COL4A6-209ENST00000545689 TMEM209Q96SK2 561 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 MTRRQ9UBK8 725 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 SNX7Q9UNH6 387 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 K7EPI3 171 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 CCR10P46092 362 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 EML3Q32P44 896 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 C9orf64Q5T6V5 341 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 CACUL1Q86Y37 369 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 TMEM126BQ8IUX1 230 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 ZNF248Q8NDW4 579 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 WFIKKN2Q8TEU8 576 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 AZIN2Q96A70 460 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 OMA1Q96E52 524 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 EBF3Q9H4W6 596 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 TRMT13Q9NUP7 481 aaKnown RBP12.36□□□□□ -0.43
COL4A6-209ENST00000545689 TAF4O00268 1085 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 PGRMC2O15173 223 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 H6PDO95479 791 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 CBSLP0DN79 551 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 COL6A1P12109 1028 aa12.36□□□□□ -0.43
COL4A6-209ENST00000545689 TCF4P15884 667 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms