RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	ZPBP	Q9BS86	351 aa		13.13	□□□□□ -0.31
POLE-222	ENST00000545015	SPRY4	Q9C004	299 aa		13.13	□□□□□ -0.31
POLE-222	ENST00000545015	CPNE5	Q9HCH3	593 aa		13.13	□□□□□ -0.31
POLE-222	ENST00000545015	LZTFL1	Q9NQ48	299 aa		13.13	□□□□□ -0.31
POLE-222	ENST00000545015	OCIAD1	Q9NX40	245 aa		13.13	□□□□□ -0.31
POLE-222	ENST00000545015	SIDT1	Q9NXL6	827 aa	Known RBP	13.13	□□□□□ -0.31
POLE-222	ENST00000545015	ZDHHC3	Q9NYG2	299 aa		13.13	□□□□□ -0.31
POLE-222	ENST00000545015	PAK5	Q9P286	719 aa		13.13	□□□□□ -0.31
POLE-222	ENST00000545015	CRLS1	Q9UJA2	301 aa		13.13	□□□□□ -0.31
POLE-222	ENST00000545015	ZNF148	Q9UQR1	794 aa		13.13	□□□□□ -0.31
POLE-222	ENST00000545015	PPP2R2C	Q9Y2T4	447 aa		13.13	□□□□□ -0.31
POLE-222	ENST00000545015	EFCAB7	A8K855	629 aa		13.12	□□□□□ -0.31
POLE-222	ENST00000545015	STMND1	H3BQB6	276 aa		13.12	□□□□□ -0.31
POLE-222	ENST00000545015	ERVH48-1	M5A8F1	160 aa		13.12	□□□□□ -0.31
POLE-222	ENST00000545015	MTHFD1	P11586	935 aa	Known RBP	13.12	□□□□□ -0.31
POLE-222	ENST00000545015	ATP1B2	P14415	290 aa	Predicted RBP	13.12	□□□□□ -0.31
POLE-222	ENST00000545015	TPH1	P17752	444 aa		13.12	□□□□□ -0.31
POLE-222	ENST00000545015	TMPRSS15	P98073	1019 aa		13.12	□□□□□ -0.31
POLE-222	ENST00000545015	ACVR1	Q04771	509 aa		13.12	□□□□□ -0.31
POLE-222	ENST00000545015	CACNG1	Q06432	222 aa		13.12	□□□□□ -0.31
POLE-222	ENST00000545015	POU6F1	Q14863	301 aa		13.12	□□□□□ -0.31
POLE-222	ENST00000545015	SKIDA1	Q1XH10	827 aa		13.12	□□□□□ -0.31
POLE-222	ENST00000545015	CCDC81	Q6ZN84	652 aa		13.12	□□□□□ -0.31
POLE-222	ENST00000545015	PRSS42	Q7Z5A4	293 aa		13.12	□□□□□ -0.31
POLE-222	ENST00000545015	ART4	Q93070	314 aa		13.12	□□□□□ -0.31
POLE-222	ENST00000545015	SGSM3	Q96HU1	749 aa		13.12	□□□□□ -0.31
POLE-222	ENST00000545015	CCM2	Q9BSQ5	444 aa		13.12	□□□□□ -0.31
POLE-222	ENST00000545015	ZNF768	Q9H5H4	540 aa	Known RBP	13.12	□□□□□ -0.31
POLE-222	ENST00000545015	CASS4	Q9NQ75	786 aa		13.12	□□□□□ -0.31
POLE-222	ENST00000545015	EIF2B3	Q9NR50	452 aa	Known RBP	13.12	□□□□□ -0.31
POLE-222	ENST00000545015	SLC39A1	Q9NY26	324 aa		13.12	□□□□□ -0.31
POLE-222	ENST00000545015	B3GALT1	Q9Y5Z6	326 aa		13.12	□□□□□ -0.31
POLE-222	ENST00000545015	MGA	Q8IWI9	3026 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	HEATR9	A2RTY3	570 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	CAPN5	O15484	640 aa	Predicted RBP	13.11	□□□□□ -0.31
POLE-222	ENST00000545015	AP2A2	O94973	939 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	IFNB1	P01574	187 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	AMD1	P17707	334 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	MAPK9	P45984	424 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	GFER	P55789	205 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	ITIH4	Q14624	930 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	TGIF1	Q15583	401 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	DCAF12	Q5T6F0	453 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	ARHGAP40	Q5TG30	622 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	CAPRIN2	Q6IMN6	1127 aa	Known RBP	13.11	□□□□□ -0.31
POLE-222	ENST00000545015	KLHL35	Q6PF15	583 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	CEACAM20	Q6UY09	585 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	PACS1	Q6VY07	963 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	DET1	Q7L5Y6	550 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	NLRP9	Q7RTR0	991 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	SERPINA9	Q86WD7	417 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	ZFAND4	Q86XD8	727 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	CCDC89	Q8N998	374 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	OR52K1	Q8NGK4	314 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	GPR150	Q8NGU9	434 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	KLHL6	Q8WZ60	621 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	TTC9	Q92623	222 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	PMEPA1	Q969W9	287 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	INSM2	Q96T92	566 aa	Predicted RBP	13.11	□□□□□ -0.31
POLE-222	ENST00000545015	ZMYND15	Q9H091	742 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	RAB6B	Q9NRW1	208 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	HOMER3	Q9NSC5	361 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	PCDHB11	Q9Y5F2	797 aa		13.11	□□□□□ -0.31
POLE-222	ENST00000545015	QSOX1	O00391	747 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	CCL22	O00626	93 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	GAS8	O95995	478 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	FGG	P02679	453 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	TYRP1	P17643	537 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	ADRA1D	P25100	572 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	MSN	P26038	577 aa	Known RBP	13.1	□□□□□ -0.31
POLE-222	ENST00000545015	NDUFS1	P28331	727 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	FOXN2	P32314	431 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	RPL22	P35268	128 aa	Known RBP	13.1	□□□□□ -0.31
POLE-222	ENST00000545015	NSG1	P42857	185 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	CD151	P48509	253 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	CDKN1C	P49918	316 aa	Predicted RBP	13.1	□□□□□ -0.31
POLE-222	ENST00000545015	RPA4	Q13156	261 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	DBN1	Q16643	649 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	ZRANB3	Q5FWF4	1079 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	PCSK4	Q6UW60	755 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	FAM129C	Q86XR2	697 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	PIANP	Q8IYJ0	282 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	CARF	Q8N187	725 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	DNAAF3	Q8N9W5	541 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	GLIS1	Q8NBF1	620 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	OR13J1	Q8NGT2	312 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	RSC1A1	Q92681	617 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	NKD1	Q969G9	470 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	ZDHHC12	Q96GR4	267 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	CD180	Q99467	661 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	FAM96A	Q9H5X1	160 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	KIR3DX1	Q9H7L2	352 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	VPS37B	Q9H9H4	285 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	PILRA	Q9UKJ1	303 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.1	□□□□□ -0.31
POLE-222	ENST00000545015	HEBP2	Q9Y5Z4	205 aa		13.1	□□□□□ -0.31
POLE-222	ENST00000545015	SMG1	Q96Q15	3661 aa	Known RBP	13.1	□□□□□ -0.31
POLE-222	ENST00000545015	GOLGA6L3	A6NEY3	463 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015		A8MU76	341 aa		13.09	□□□□□ -0.31
POLE-222	ENST00000545015	AP3B1	O00203	1094 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms