RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 TDGF1P13385 188 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 STMN1P16949 149 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 CD9P21926 228 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 XPAP23025 273 aaPredicted RBP6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 PGM1P36871 562 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 PTGER3P43115 390 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 RPS9P46781 194 aaKnown RBP6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 SLC12A2P55011 1212 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 RAB10P61026 200 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 MTAPQ13126 283 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 PRKAA1Q13131 559 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 LRRC32Q14392 662 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 GBX1Q14549 363 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 USP10Q14694 798 aaKnown RBP6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 ACOX1Q15067 660 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 TRMT5Q32P41 509 aaKnown RBP6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 LIPMQ5VYY2 423 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 MACC1Q6ZN28 852 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 RAPH1Q70E73 1250 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 NET1Q7Z628 596 aaPredicted RBP6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 TRIM74Q86UV6 250 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 C10orf107Q8IVU9 208 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 PAF1Q8N7H5 531 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 BTN2A2Q8WVV5 523 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 HMGB4Q8WW32 186 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 AP2M1Q96CW1 435 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 NUS1Q96E22 293 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 COX14Q96I36 57 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 HHIPQ96QV1 700 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 ZSCAN5AQ9BUG6 496 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 DYRK4Q9NR20 520 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 OXSMQ9NWU1 459 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 ZDHHC3Q9NYG2 299 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 CORO1CQ9ULV4 474 aaPredicted RBP6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 SCML1Q9UN30 329 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 MRPS17Q9Y2R5 130 aaKnown RBP6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 VWA7Q9Y334 891 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 RAP2CQ9Y3L5 183 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 SLCO1B1Q9Y6L6 691 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 SLC30A1Q9Y6M5 507 aa6.9□□□□□ -1.3
HMGCS2-204ENST00000544913 FRYLO94915 3013 aa6.9□□□□□ -1.31
HMGCS2-204ENST00000544913 PRMT5O14744 637 aaPredicted RBP6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 RNGTTO60942 597 aaKnown RBP6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 PEX11AO75192 247 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 TM7SF2O76062 418 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 ESR1P03372 595 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 IGHV4-34P06331 123 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 TPBGLP0DKB5 382 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 PKMP14618 531 aaKnown RBP6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 ZNF37AP17032 561 aaPredicted RBP6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 TEAD1P28347 426 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 FMO4P31512 558 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 IGFALSP35858 605 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 TRIM23P36406 574 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 KCNC1P48547 511 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 CTSCP53634 463 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 ITGA9Q13797 1035 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 IRF4Q15306 451 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 MAP7D1Q3KQU3 841 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 AARS2Q5JTZ9 985 aaKnown RBP6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 TPRG1LQ5T0D9 272 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 ANO7Q6IWH7 933 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 C16orf46Q6P387 395 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 KLC3Q6P597 504 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 KIAA1324Q6UXG2 1013 aaKnown RBP6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 ADAMTSL4Q6UY14 1074 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 ZYG11AQ6WRX3 759 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 TAS2R42Q7RTR8 314 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 FAM124AQ86V42 546 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 KBTBD6Q86V97 674 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 TRIM69Q86WT6 500 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 HORMAD1Q86X24 394 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 RASGRP3Q8IV61 690 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 ZNF547Q8IVP9 402 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 RBFAQ8N0V3 343 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 SPATA6LQ8N4H0 392 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 SPEM1Q8N4L4 309 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 AFAP1L2Q8N4X5 818 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 RASGEF1AQ8N9B8 481 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 OR14C36Q8NHC7 312 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 KCTD4Q8WVF5 259 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 KCNJ9Q92806 393 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 GLYATL1Q969I3 302 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 SHDQ96IW2 340 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 ELMO2Q96JJ3 720 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 FAR2Q96K12 515 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 NELL2Q99435 816 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 MRPL57Q9BQC6 102 aaKnown RBP6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 LGR4Q9BXB1 951 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 SPATA16Q9BXB7 569 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 DRC3Q9H069 523 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 DENND2DQ9H6A0 471 aaPredicted RBP6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 PREBQ9HCU5 417 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 NDE1Q9NXR1 346 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 BCAP29Q9UHQ4 241 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 CRLS1Q9UJA2 301 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 MCM8Q9UJA3 840 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 LRRC42Q9Y546 428 aa6.89□□□□□ -1.31
HMGCS2-204ENST00000544913 USP34Q70CQ2 3546 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms