RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 F13A1P00488 732 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 CYP2A6P11509 494 aaPredicted RBP4.66□□□□□ -1.66
LIMS1-214ENST00000542845 XRCC1P18887 633 aaPredicted RBP4.66□□□□□ -1.66
LIMS1-214ENST00000542845 CYP2A7P20853 494 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 RPL10P27635 214 aaKnown RBP4.66□□□□□ -1.66
LIMS1-214ENST00000542845 PCSK6P29122 969 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 FOLR3P41439 243 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 CA7P43166 264 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 ZNF165P49910 485 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 MEOX1P50221 254 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 DRG2P55039 364 aaKnown RBP4.66□□□□□ -1.66
LIMS1-214ENST00000542845 FOXL2P58012 376 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 UBE2IP63279 158 aaKnown RBP4.66□□□□□ -1.66
LIMS1-214ENST00000542845 HSD11B2P80365 405 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 FKBP3Q00688 224 aaKnown RBP4.66□□□□□ -1.66
LIMS1-214ENST00000542845 OTUD4Q01804 1114 aaKnown RBP4.66□□□□□ -1.66
LIMS1-214ENST00000542845 GCNT1Q02742 428 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 PTSQ03393 145 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 GPR18Q14330 331 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 SSPNQ14714 243 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 SLC9A5Q14940 896 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 CYP2A13Q16696 494 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 INSCQ1MX18 579 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 ZCWPW2Q504Y3 356 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 DNTTIP2Q5QJE6 756 aaKnown RBP4.66□□□□□ -1.66
LIMS1-214ENST00000542845 TMTC4Q5T4D3 741 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 ZNF648Q5T619 568 aaPredicted RBP4.66□□□□□ -1.66
LIMS1-214ENST00000542845 AGAP7PQ5VUJ5 663 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 IRAK1BP1Q5VVH5 260 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 PLEKHA7Q6IQ23 1121 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 SCYL2Q6P3W7 929 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 CLEC9AQ6UXN8 241 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 PRSS42Q7Z5A4 293 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 MRGPREQ86SM8 312 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 CREBRFQ8IUR6 639 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 SULF2Q8IWU5 870 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 SYTL1Q8IYJ3 562 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 AVL9Q8NBF6 648 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 ZNF397Q8NF99 534 aaPredicted RBP4.66□□□□□ -1.66
LIMS1-214ENST00000542845 EXD1Q8NHP7 514 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 FBXO27Q8NI29 283 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 LMO3Q8TAP4 145 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 PPP4R1Q8TF05 950 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 NT5C3BQ969T7 300 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 ZNF501Q96CX3 271 aaPredicted RBP4.66□□□□□ -1.66
LIMS1-214ENST00000542845 CXorf40BQ96DE9 158 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 C18orf8Q96DM3 657 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 CELF6Q96J87 481 aaKnown RBP4.66□□□□□ -1.66
LIMS1-214ENST00000542845 AGAP4Q96P64 663 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 FCRL4Q96PJ5 515 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 SPOCK3Q9BQ16 436 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 SLX1AQ9BQ83 275 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 NDC1Q9BTX1 674 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 RIOK2Q9BVS4 552 aaKnown RBP4.66□□□□□ -1.66
LIMS1-214ENST00000542845 CINPQ9BW66 212 aaPredicted RBP4.66□□□□□ -1.66
LIMS1-214ENST00000542845 TLR10Q9BXR5 811 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 BHLHE41Q9C0J9 482 aaPredicted RBP4.66□□□□□ -1.66
LIMS1-214ENST00000542845 LACRTQ9GZZ8 138 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 CLEC4MQ9H2X3 399 aaPredicted RBP4.66□□□□□ -1.66
LIMS1-214ENST00000542845 NOL6Q9H6R4 1146 aaKnown RBP4.66□□□□□ -1.66
LIMS1-214ENST00000542845 EPS8L2Q9H6S3 715 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 ACTR5Q9H9F9 607 aaPredicted RBP4.66□□□□□ -1.66
LIMS1-214ENST00000542845 SAMSN1Q9NSI8 373 aaKnown RBP4.66□□□□□ -1.66
LIMS1-214ENST00000542845 P4HTMQ9NXG6 502 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 ZNF624Q9P2J8 865 aaPredicted RBP4.66□□□□□ -1.66
LIMS1-214ENST00000542845 SEC14L3Q9UDX4 400 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 MTMR6Q9Y217 621 aa4.66□□□□□ -1.66
LIMS1-214ENST00000542845 MORC2Q9Y6X9 1032 aaPredicted RBP4.66□□□□□ -1.66
LIMS1-214ENST00000542845 ZNF469Q96JG9 3925 aaPredicted RBP4.65□□□□□ -1.66
LIMS1-214ENST00000542845 NPIPB15A6NHN6 443 aaPredicted RBP4.65□□□□□ -1.67
LIMS1-214ENST00000542845 OR52A4PA6NMU1 304 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 TMEM150CB9EJG8 249 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 DFFAO00273 331 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 TRAFD1O14545 582 aaPredicted RBP4.65□□□□□ -1.67
LIMS1-214ENST00000542845 PCDH17O14917 1159 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 SLC16A3O15427 465 aaKnown RBP4.65□□□□□ -1.67
LIMS1-214ENST00000542845 YEATS4O95619 227 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 SOD1P00441 154 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 F10P00742 488 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 IGHEP01854 428 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 CAPN1P07384 714 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 UQCRHP07919 91 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 PFKFB1P16118 471 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 AGXTP21549 392 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 LHCGRP22888 699 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 HSD3B2P26439 372 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 PRCPP42785 496 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 CAPZBP47756 277 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 CSNK1DP48730 415 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 PAPOLAP51003 745 aaKnown RBP4.65□□□□□ -1.67
LIMS1-214ENST00000542845 PMS1P54277 932 aaKnown RBP4.65□□□□□ -1.67
LIMS1-214ENST00000542845 STX17P56962 302 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 YBEYP58557 167 aaPredicted RBP4.65□□□□□ -1.67
LIMS1-214ENST00000542845 RPS26P62854 115 aaKnown RBP4.65□□□□□ -1.67
LIMS1-214ENST00000542845 TUBB4BP68371 445 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 APBA1Q02410 837 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 RBPJQ06330 500 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 PCDH1Q08174 1060 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 TUBB2AQ13885 445 aa4.65□□□□□ -1.67
LIMS1-214ENST00000542845 NCF4Q15080 339 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms