RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.29□□□□□ -0.6
C2CD3-217ENST00000542452 MN1Q10571 1320 aaPredicted RBP11.29□□□□□ -0.6
C2CD3-217ENST00000542452 CES2O00748 559 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 OR1I1O60431 355 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 VIPP01282 170 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 ITGA2BP08514 1039 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 ATP1B2P14415 290 aaPredicted RBP11.28□□□□□ -0.6
C2CD3-217ENST00000542452 VCLP18206 1134 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 ARNTP27540 789 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 NMBRP28336 390 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 PPP1CAP62136 330 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 CCDC173Q0VFZ6 552 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 GPS1Q13098 491 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 EIF3IQ13347 325 aaKnown RBP11.28□□□□□ -0.6
C2CD3-217ENST00000542452 CLPPQ16740 277 aaPredicted RBP11.28□□□□□ -0.6
C2CD3-217ENST00000542452 COL28A1Q2UY09 1125 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 METRNLQ641Q3 311 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 TMEM71Q6P5X7 295 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 LRRC8BQ6P9F7 803 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 CCDC137Q6PK04 289 aaKnown RBP11.28□□□□□ -0.6
C2CD3-217ENST00000542452 AFTPHQ6ULP2 937 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 CES3Q6UWW8 571 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 LDB1Q86U70 411 aaPredicted RBP11.28□□□□□ -0.6
C2CD3-217ENST00000542452 CAND1Q86VP6 1230 aaKnown RBP11.28□□□□□ -0.6
C2CD3-217ENST00000542452 TRIM48Q8IWZ4 208 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 LSMEM2Q8N112 164 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 AGGF1Q8N302 714 aaeCLIP11.28□□□□□ -0.6
C2CD3-217ENST00000542452 MPP5Q8N3R9 675 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 PPHLN1Q8NEY8 458 aaKnown RBP11.28□□□□□ -0.6
C2CD3-217ENST00000542452 OR10G6Q8NH81 332 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 HM13Q8TCT9 377 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 HNRNPLLQ8WVV9 542 aaKnown RBP11.28□□□□□ -0.6
C2CD3-217ENST00000542452 DCUN1D1Q96GG9 259 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 NAF1Q96HR8 494 aaKnown RBP11.28□□□□□ -0.6
C2CD3-217ENST00000542452 ZNF514Q96K75 400 aaPredicted RBP11.28□□□□□ -0.6
C2CD3-217ENST00000542452 NRTNQ99748 197 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 STRADBQ9C0K7 418 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 STN1Q9H668 368 aaKnown RBP11.28□□□□□ -0.6
C2CD3-217ENST00000542452 COG4Q9H9E3 785 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 SLC40A1Q9NP59 571 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 CHRAC1Q9NRG0 131 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 HOMER3Q9NSC5 361 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 FOXJ2Q9P0K8 574 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 PDP2Q9P2J9 529 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 AHCTF1Q8WYP5 2266 aa11.28□□□□□ -0.6
C2CD3-217ENST00000542452 CFAP47Q6ZTR5 3102 aa11.27□□□□□ -0.6
C2CD3-217ENST00000542452 CHD6Q8TD26 2715 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 C9orf172C9J069 976 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 CFAP99D6REC4 459 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 TMX2-CTNND1H3BSU7 103 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 KCNJ13O60928 360 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 AVILO75366 819 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 MTHFD1P11586 935 aaKnown RBP11.27□□□□□ -0.61
C2CD3-217ENST00000542452 TYRP1P17643 537 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 PDHA2P29803 388 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 CAPZBP47756 277 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 PREPP48147 710 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 LEPRP48357 1165 aaKnown RBP11.27□□□□□ -0.61
C2CD3-217ENST00000542452 FNTAP49354 379 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 PCBP4P57723 403 aaKnown RBP11.27□□□□□ -0.61
C2CD3-217ENST00000542452 ERVPABLB-1P60509 514 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 GNG11P61952 73 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 ITIH4Q14624 930 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 GSE1Q14687 1217 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 SKIDA1Q1XH10 827 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 PCID2Q5JVF3 399 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 SNAP47Q5SQN1 464 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 PAPD7Q5XG87 772 aaKnown RBP11.27□□□□□ -0.61
C2CD3-217ENST00000542452 C4orf22Q6V702 233 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 PACS1Q6VY07 963 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 ARHGAP22Q7Z5H3 698 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 SPACA3Q8IXA5 215 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 ANP32BQ92688 251 aaKnown RBP11.27□□□□□ -0.61
C2CD3-217ENST00000542452 SH3KBP1Q96B97 665 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 CXorf40BQ96DE9 158 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 CAPZA3Q96KX2 299 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.27□□□□□ -0.61
C2CD3-217ENST00000542452 ZMYND15Q9H091 742 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 DDX47Q9H0S4 455 aaKnown RBP11.27□□□□□ -0.61
C2CD3-217ENST00000542452 OR52A5Q9H2C5 316 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 THSD1Q9NS62 852 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 IMP3Q9NV31 184 aaKnown RBP11.27□□□□□ -0.61
C2CD3-217ENST00000542452 OCIAD1Q9NX40 245 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 KLHL3Q9UH77 587 aa11.27□□□□□ -0.61
C2CD3-217ENST00000542452 HGSO14964 777 aaPredicted RBP11.26□□□□□ -0.61
C2CD3-217ENST00000542452 PRAMEF10O60809 474 aa11.26□□□□□ -0.61
C2CD3-217ENST00000542452 UBXN7O94888 489 aa11.26□□□□□ -0.61
C2CD3-217ENST00000542452 C9P02748 559 aa11.26□□□□□ -0.61
C2CD3-217ENST00000542452 POLBP06746 335 aa11.26□□□□□ -0.61
C2CD3-217ENST00000542452 F7P08709 466 aaPredicted RBP11.26□□□□□ -0.61
C2CD3-217ENST00000542452 JMJD7P0C870 316 aa11.26□□□□□ -0.61
C2CD3-217ENST00000542452 RALBP11234 206 aa11.26□□□□□ -0.61
C2CD3-217ENST00000542452 FGF3P11487 239 aaPredicted RBP11.26□□□□□ -0.61
C2CD3-217ENST00000542452 RBMS1P29558 406 aaKnown RBP11.26□□□□□ -0.61
C2CD3-217ENST00000542452 SLC5A2P31639 672 aa11.26□□□□□ -0.61
C2CD3-217ENST00000542452 HALP42357 657 aa11.26□□□□□ -0.61
C2CD3-217ENST00000542452 MLLT3P42568 568 aaPredicted RBP11.26□□□□□ -0.61
C2CD3-217ENST00000542452 PTGIRP43119 386 aa11.26□□□□□ -0.61
C2CD3-217ENST00000542452 MAPK10P53779 464 aa11.26□□□□□ -0.61
C2CD3-217ENST00000542452 TRA2AQ13595 282 aaKnown RBP eCLIP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms