RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 GAD2Q05329 585 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 CWF19L1Q69YN2 538 aaKnown RBP10.62□□□□□ -0.71
GABRB3-204ENST00000541819 LRRC69Q6ZNQ3 347 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 ZNF227Q86WZ6 799 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 HID1Q8IV36 788 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 RASGRP3Q8IV61 690 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 PRSS58Q8IYP2 241 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 DUSP9Q99956 384 aaKnown RBP10.62□□□□□ -0.71
GABRB3-204ENST00000541819 C11orf16Q9NQ32 467 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 PNPOQ9NVS9 261 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 EURLQ9NYK6 297 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 E9PAM4 449 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 MID1O15344 667 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 MSI1O43347 362 aaKnown RBP10.62□□□□□ -0.71
GABRB3-204ENST00000541819 KAT7O95251 611 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 SHBGP04278 402 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 HTR7P34969 479 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 RIN1Q13671 783 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 AUHQ13825 339 aaKnown RBP10.62□□□□□ -0.71
GABRB3-204ENST00000541819 UBXN2BQ14CS0 331 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 OR10H4Q8NGA5 316 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 AKAP1Q92667 903 aaKnown RBP eCLIP10.62□□□□□ -0.71
GABRB3-204ENST00000541819 PTPN18Q99952 460 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 LRRC19Q9H756 370 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 PTPRUQ92729 1446 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 SNX3O60493 162 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 DNAJA2O60884 412 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 TULP3O75386 442 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 ZNF806P0C7X5 589 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 COL6A2P12110 1019 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 PTPN2P17706 415 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 FSHRP23945 695 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 PTX3P26022 381 aaPredicted RBP10.62□□□□□ -0.71
GABRB3-204ENST00000541819 HSD11B1P28845 292 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 OC90Q02509 493 aaPredicted RBP10.62□□□□□ -0.71
GABRB3-204ENST00000541819 HEPACAMQ14CZ8 416 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 TMEM44Q2T9K0 475 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 VSIG10LQ86VR7 867 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 SPPL2CQ8IUH8 684 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 ZNF527Q8NB42 609 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 SHC3Q92529 594 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 UFD1Q92890 307 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 NMUR1Q9HB89 426 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 MRPS30Q9NP92 439 aaKnown RBP10.62□□□□□ -0.71
GABRB3-204ENST00000541819 TMEM5Q9Y2B1 443 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 POLR1AO95602 1720 aaPredicted RBP10.62□□□□□ -0.71
GABRB3-204ENST00000541819 CLTCL1P53675 1640 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 SMIM35A0A1B0GVV1 85 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 SAGE2PA6NJ88 616 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 OR2AG2A6NM03 316 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 H0YJX3 145 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 H3BUI4 141 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 IPO13O94829 963 aaKnown RBP10.62□□□□□ -0.71
GABRB3-204ENST00000541819 POP4O95707 220 aaKnown RBP10.62□□□□□ -0.71
GABRB3-204ENST00000541819 NDST3O95803 873 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 ALPPP05187 535 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 PAX7P23759 505 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 CHAF1BQ13112 559 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 ITGA7Q13683 1181 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 HFE2Q6ZVN8 426 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 ZNF627Q7L945 461 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 FAM71AQ8IYT1 594 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 C7orf61Q8IZ16 206 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 OR2T34Q8NGX1 318 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 OR2T3Q8NH03 318 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 LRRN4Q8WUT4 740 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 P2RY11Q96G91 374 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 HEPHQ9BQS7 1158 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 TBC1D10AQ9BXI6 508 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 ACSS3Q9H6R3 686 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 NOL11Q9H8H0 719 aaKnown RBP10.62□□□□□ -0.71
GABRB3-204ENST00000541819 ZNF224Q9NZL3 707 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 GLS2Q9UI32 602 aa10.62□□□□□ -0.71
GABRB3-204ENST00000541819 ELOA3DA6NLF2 546 aaPredicted RBP10.61□□□□□ -0.71
GABRB3-204ENST00000541819 CCNKO75909 580 aa10.61□□□□□ -0.71
GABRB3-204ENST00000541819 CCNFP41002 786 aa10.61□□□□□ -0.71
GABRB3-204ENST00000541819 MLLT3P42568 568 aaPredicted RBP10.61□□□□□ -0.71
GABRB3-204ENST00000541819 MAGEA2P43356 314 aa10.61□□□□□ -0.71
GABRB3-204ENST00000541819 ELOA3BQ3SY89 546 aa10.61□□□□□ -0.71
GABRB3-204ENST00000541819 CAND1Q86VP6 1230 aaKnown RBP10.61□□□□□ -0.71
GABRB3-204ENST00000541819 SLITRK4Q8IW52 837 aa10.61□□□□□ -0.71
GABRB3-204ENST00000541819 SLC30A8Q8IWU4 369 aa10.61□□□□□ -0.71
GABRB3-204ENST00000541819 SDR16C5Q8N3Y7 309 aa10.61□□□□□ -0.71
GABRB3-204ENST00000541819 ARL10Q8N8L6 244 aa10.61□□□□□ -0.71
GABRB3-204ENST00000541819 ELOA3Q8NG57 546 aa10.61□□□□□ -0.71
GABRB3-204ENST00000541819 IPPKQ9H8X2 491 aa10.61□□□□□ -0.71
GABRB3-204ENST00000541819 PNO1Q9NRX1 252 aaKnown RBP10.61□□□□□ -0.71
GABRB3-204ENST00000541819 RCOR3Q9P2K3 495 aaPredicted RBP10.61□□□□□ -0.71
GABRB3-204ENST00000541819 PRAMEF33A0A0G2JMD5 474 aa10.61□□□□□ -0.71
GABRB3-204ENST00000541819 C5orf51A6NDU8 294 aa10.61□□□□□ -0.71
GABRB3-204ENST00000541819 PRAMEF10O60809 474 aa10.61□□□□□ -0.71
GABRB3-204ENST00000541819 PRAMEF1O95521 474 aa10.61□□□□□ -0.71
GABRB3-204ENST00000541819 CCNE2O96020 404 aa10.61□□□□□ -0.71
GABRB3-204ENST00000541819 LINGO3P0C6S8 592 aa10.61□□□□□ -0.71
GABRB3-204ENST00000541819 PRKCIP41743 596 aa10.61□□□□□ -0.71
GABRB3-204ENST00000541819 PRKD1Q15139 912 aaPredicted RBP10.61□□□□□ -0.71
GABRB3-204ENST00000541819 SMARCD3Q6STE5 483 aa10.61□□□□□ -0.71
GABRB3-204ENST00000541819 PRR23BQ6ZRT6 265 aa10.61□□□□□ -0.71
GABRB3-204ENST00000541819 ABHD13Q7L211 337 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms