RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	OLIG2	Q13516	323 aa		12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	NFE2L1	Q14494	772 aa		12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	PARP6	Q2NL67	630 aa		12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	ZNF658B	Q4V348	819 aa	Predicted RBP	12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	CCDC181	Q5TID7	509 aa		12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	CAPRIN2	Q6IMN6	1127 aa	Known RBP	12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	BORA	Q6PGQ7	559 aa		12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	DARS2	Q6PI48	645 aa	Known RBP	12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	ESX1	Q8N693	406 aa		12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	TTC13	Q8NBP0	860 aa		12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	ACRBP	Q8NEB7	543 aa		12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	GPR150	Q8NGU9	434 aa		12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	CCDC110	Q8TBZ0	833 aa		12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	UBE2Q2	Q8WVN8	375 aa		12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	SLC41A2	Q96JW4	573 aa		12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	TGM7	Q96PF1	710 aa		12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	FCRL4	Q96PJ5	515 aa		12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	BAG1	Q99933	345 aa	Predicted RBP	12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	ZMYND15	Q9H091	742 aa		12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	ASB8	Q9H765	288 aa		12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	KLHL3	Q9UH77	587 aa		12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	TUBD1	Q9UJT1	453 aa		12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	AMFR	Q9UKV5	643 aa		12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	KCTD3	Q9Y597	815 aa		12.83	□□□□□ -0.36
SEMA4D-223	ENST00000540475	UBR5	O95071	2799 aa	Predicted RBP	12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	SETX	Q7Z333	2677 aa	Known RBP	12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	TRBV5-4	A0A0C4DH59	114 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	DDX3Y	O15523	660 aa	Known RBP	12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	KIF1C	O43896	1103 aa	Known RBP	12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	RECK	O95980	971 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	FAM87A	P0C7U9	286 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	MTHFD1	P11586	935 aa	Known RBP	12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	ZNF28	P17035	718 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	MSH3	P20585	1137 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	HADHA	P40939	763 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	PPM1F	P49593	454 aa	Predicted RBP	12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	GPR33	Q49SQ1	333 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	FNBP1L	Q5T0N5	605 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	KLHL35	Q6PF15	583 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	SNX20	Q7Z614	316 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	BPHL	Q86WA6	291 aa	Predicted RBP	12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	GAS2L3	Q86XJ1	694 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	SYCE1	Q8N0S2	351 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	CARF	Q8N187	725 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	SLC35B2	Q8TB61	432 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	HEXDC	Q8WVB3	486 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	UBXN4	Q92575	508 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	ULK4	Q96C45	1275 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	HES6	Q96HZ4	224 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	INSM2	Q96T92	566 aa	Predicted RBP	12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	CD180	Q99467	661 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	FAM118B	Q9BPY3	351 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	TBL1Y	Q9BQ87	522 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	ARHGAP9	Q9BRR9	750 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	WDR70	Q9NW82	654 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	IMPACT	Q9P2X3	320 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	TRIM10	Q9UDY6	481 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	FKBPL	Q9UIM3	349 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	MYO18B	Q8IUG5	2567 aa		12.82	□□□□□ -0.36
SEMA4D-223	ENST00000540475	IGHV5-51	A0A0C4DH38	117 aa		12.81	□□□□□ -0.36
SEMA4D-223	ENST00000540475	CDC25B	P30305	580 aa		12.81	□□□□□ -0.36
SEMA4D-223	ENST00000540475	PRLHR	P49683	370 aa		12.81	□□□□□ -0.36
SEMA4D-223	ENST00000540475	NAP1L1	P55209	391 aa	Known RBP	12.81	□□□□□ -0.36
SEMA4D-223	ENST00000540475	SH3BP2	P78314	561 aa		12.81	□□□□□ -0.36
SEMA4D-223	ENST00000540475	CACHD1	Q5VU97	1274 aa		12.81	□□□□□ -0.36
SEMA4D-223	ENST00000540475	CYB5D1	Q6P9G0	228 aa		12.81	□□□□□ -0.36
SEMA4D-223	ENST00000540475	PEX26	Q7Z412	305 aa		12.81	□□□□□ -0.36
SEMA4D-223	ENST00000540475	KMT5C	Q86Y97	462 aa		12.81	□□□□□ -0.36
SEMA4D-223	ENST00000540475	NXPE1	Q8N323	547 aa		12.81	□□□□□ -0.36
SEMA4D-223	ENST00000540475	UBL4B	Q8N7F7	174 aa		12.81	□□□□□ -0.36
SEMA4D-223	ENST00000540475	OR13C4	Q8NGS5	318 aa		12.81	□□□□□ -0.36
SEMA4D-223	ENST00000540475	KIAA1143	Q96AT1	154 aa	Predicted RBP	12.81	□□□□□ -0.36
SEMA4D-223	ENST00000540475	OR6C1	Q96RD1	312 aa		12.81	□□□□□ -0.36
SEMA4D-223	ENST00000540475	APOL2	Q9BQE5	337 aa		12.81	□□□□□ -0.36
SEMA4D-223	ENST00000540475	CCM2	Q9BSQ5	444 aa		12.81	□□□□□ -0.36
SEMA4D-223	ENST00000540475	SLC25A18	Q9H1K4	315 aa		12.81	□□□□□ -0.36
SEMA4D-223	ENST00000540475	GPN2	Q9H9Y4	310 aa	Predicted RBP	12.81	□□□□□ -0.36
SEMA4D-223	ENST00000540475	IL17B	Q9UHF5	180 aa		12.81	□□□□□ -0.36
SEMA4D-223	ENST00000540475	PSMD13	Q9UNM6	376 aa		12.81	□□□□□ -0.36
SEMA4D-223	ENST00000540475	OR5K3	A6NET4	321 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	NKX2-8	O15522	239 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	SUV39H1	O43463	412 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	SPAG6	O75602	509 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	METTL18	O95568	372 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	ATP1B2	P14415	290 aa	Predicted RBP	12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	F8A1	P23610	371 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	AKT1	P31749	480 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	SEPHS1	P49903	392 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	PPP1CA	P62136	330 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	MC1R	Q01726	317 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	FOXM1	Q08050	763 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	KIF5A	Q12840	1032 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	C6orf15	Q6UXA7	325 aa	Predicted RBP	12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	FAM92B	Q6ZTR7	304 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	TXLNB	Q8N3L3	684 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	D2HGDH	Q8N465	521 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	RNF10	Q8N5U6	811 aa	Known RBP	12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	LRRC45	Q96CN5	670 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	WWP1	Q9H0M0	922 aa		12.8	□□□□□ -0.36

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