RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 CHST15Q7LFX5 561 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-203ENST00000540357 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-203ENST00000540357 VPS35Q96QK1 796 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 OCEL1Q9H607 264 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 MARCH7Q9H992 704 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 NANOGQ9H9S0 305 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 NECTIN3Q9NQS3 549 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 PRG3Q9Y2Y8 225 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-203ENST00000540357 H0Y858 1186 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 EGFRP00533 1210 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 PGK1P00558 417 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 PHC1P78364 1004 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 EN1Q05925 392 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-203ENST00000540357 PYDC2Q56P42 97 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 BLOC1S3Q6QNY0 202 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 MON1AQ86VX9 555 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 ZZZ3Q8IYH5 903 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 CLEC4MQ9H2X3 399 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-203ENST00000540357 ERVK-11Q9UQG0 969 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 H7C4K7 107 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 NME4O00746 187 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 PPEF2O14830 753 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 HOXD12P35452 270 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 HNF4AP41235 474 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 SPIBQ01892 262 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 SCN1BQ07699 218 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 ZNF181Q2M3W8 571 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 FAM174BQ3ZCQ3 159 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 ZNF404Q494X3 552 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 ARMC12Q5T9G4 340 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 ZNF280DQ6N043 979 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 SCML4Q8N228 414 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 LIX1Q8N485 282 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 SH3KBP1Q96B97 665 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 MMP27Q9H306 513 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 GIT1Q9Y2X7 761 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 TRPV2Q9Y5S1 764 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 ILVBLA1L0T0 632 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 ECI2O75521 394 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 CRATP43155 626 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 BMXP51813 675 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 YBEYP58557 167 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-203ENST00000540357 FBXO48Q5FWF7 155 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 DGKKQ5KSL6 1271 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 C6orf183Q5T699 404 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 SLC16A10Q8TF71 515 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 REPS1Q96D71 796 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 SNX7Q9UNH6 387 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 PRKD3O94806 890 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 MATN4O95460 622 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 CHRNA1P02708 482 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 SPATA31D3P0C874 917 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 VARSP26640 1264 aaKnown RBP12.85□□□□□ -0.35
DNMT1-203ENST00000540357 CXCR3P49682 368 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 ANXA11P50995 505 aaKnown RBP12.85□□□□□ -0.35
DNMT1-203ENST00000540357 HUNKP57058 714 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 FBXO43Q4G163 708 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 TPRG1LQ5T0D9 272 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 SPATA31D4Q6ZUB0 917 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 CARNMT1Q8N4J0 409 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 HMCESQ96FZ2 354 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 BTN2A3PQ96KV6 586 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 SLC2A13Q96QE2 648 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 CHCHD6Q9BRQ6 235 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 FUNDC2Q9BWH2 189 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 VPS4AQ9UN37 437 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 ARIH1Q9Y4X5 557 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-203ENST00000540357 NUMBLQ9Y6R0 609 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 MPZL2O60487 215 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 ATE1O95260 518 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 INHBCP55103 352 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 IL10RBQ08334 325 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 ACOX1Q15067 660 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 TIGD6Q17RP2 521 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 KLHL12Q53G59 568 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 GJC2Q5T442 439 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-203ENST00000540357 ANXA8L1Q5VT79 327 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 MFSD14CQ5VZR4 134 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 SULT1C3Q6IMI6 304 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 L3HYPDHQ96EM0 354 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 DERL2Q9GZP9 239 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 SOX17Q9H6I2 414 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-203ENST00000540357 BPIFA1Q9NP55 256 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 MKLN1Q9UL63 735 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 CCL15-CCL14A0A0B4J2E2 113 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 ACOT8O14734 319 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 AURKAO14965 403 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 ERN1O75460 977 aaKnown RBP12.85□□□□□ -0.35
DNMT1-203ENST00000540357 PRKAR1AP10644 381 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 PRPS2P11908 318 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 PTX3P26022 381 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-203ENST00000540357 DNAJA1P31689 397 aaKnown RBP12.85□□□□□ -0.35
DNMT1-203ENST00000540357 KIR3DL1P43629 444 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 GPR15P49685 360 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 CCL15Q16663 113 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 UNC50Q53HI1 259 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 FAM131AQ6UXB0 335 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 HFE2Q6ZVN8 426 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 CLEC14AQ86T13 490 aa12.85□□□□□ -0.35
DNMT1-203ENST00000540357 ABHD11Q8NFV4 315 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms