RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 RGSL1A5PLK6 1076 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 PRMT5O14744 637 aaPredicted RBP16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 H2AFYO75367 372 aaKnown RBP16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 ESR1P03372 595 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 CHRNGP07510 517 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 RPL5P46777 297 aaKnown RBP16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 SPINT3P49223 89 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 THOP1P52888 689 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 ARHGEF7Q14155 803 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 HNRNPA1L2Q32P51 320 aaKnown RBP16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 SH2D4BQ5SQS7 431 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 DSELQ8IZU8 1212 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 KYQ8NBH2 561 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 LRGUKQ96M69 825 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 RIPOR3Q96MK2 946 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 WDR55Q9H6Y2 383 aaPredicted RBP16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 SYTL2Q9HCH5 934 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 SARS2Q9NP81 518 aaKnown RBP16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 CRLS1Q9UJA2 301 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 HCN2Q9UL51 889 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 PRSS21Q9Y6M0 314 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 TCF20Q9UGU0 1960 aaKnown RBP16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 TSPAN11A1L157 253 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 UPK3BL1B0FP48 263 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 UPK3BL2E5RIL1 263 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 KPNA3O00505 521 aaPredicted RBP16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 VPS26AO75436 327 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 CLPTM1O96005 669 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 TFAP2AP05549 437 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 ATP5F1P24539 256 aaPredicted RBP16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 ACRV1P26436 265 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 MRPS22P82650 360 aaKnown RBP16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 FLOT2Q14254 428 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 ATP13A5Q4VNC0 1218 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 BNC2Q6ZN30 1099 aaPredicted RBP16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 CCNYL1Q8N7R7 359 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 MIPOL1Q8TD10 442 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 LRIG1Q96JA1 1093 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 CDRT15Q96T59 188 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 ILKAPQ9H0C8 392 aaPredicted RBP16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 IKZF3Q9UKT9 509 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 RAB26Q9ULW5 256 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 MTCH2Q9Y6C9 303 aa16.85■□□□□ 0.29
PCDHB17P-201ENST00000539533 PRUNE2Q8WUY3 3088 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 E5RI56 91 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 MATN2O00339 956 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 NEMP1O14524 444 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 VILLO15195 856 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 KAT7O95251 611 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 ZNF7P17097 686 aaPredicted RBP16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 XRCC1P18887 633 aaPredicted RBP16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 MPSTP25325 297 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 VIPR1P32241 457 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 ADGRE1Q14246 886 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 OR4D1Q15615 310 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 SERPINA13PQ6UXR4 307 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 PARS2Q7L3T8 475 aaKnown RBP16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 HSD11B1LQ7Z5J1 315 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 CD200R1Q8TD46 325 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 KCNJ9Q92806 393 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 PHF21BQ96EK2 531 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 ACOX2Q99424 681 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 TRMT61BQ9BVS5 477 aaKnown RBP16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 DRC3Q9H069 523 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 TMEM245Q9H330 911 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 FBRSL1Q9HCM7 1045 aaKnown RBP16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 PTTG2Q9NZH5 202 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 KIAA1549LQ6ZVL6 1849 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 BRWD1Q9NSI6 2320 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 A8MT66 165 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 AGAP14A8MT82 685 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 CYP2A6P11509 494 aaPredicted RBP16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 TPP2P29144 1249 aaPredicted RBP16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 SOX9P48436 509 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 ZNF423Q2M1K9 1284 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 GPR33Q49SQ1 333 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 PIGGQ5H8A4 983 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 ARL13AQ5H913 290 aaPredicted RBP16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 ZFP1Q6P2D0 407 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 RBM44Q6ZP01 1051 aaKnown RBP16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 TMEM126BQ8IUX1 230 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 NXPE1Q8N323 547 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 EXT2Q93063 718 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 PPP1R36Q96LQ0 422 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 CLPBQ9H078 707 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 DKK3Q9UBP4 350 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 TRMT6Q9UJA5 497 aaKnown RBP16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 RIMS3Q9UJD0 308 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 PCDHGB4Q9UN71 923 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 PCDHGB5Q9Y5G0 923 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 GMEB1Q9Y692 573 aa16.84■□□□□ 0.29
PCDHB17P-201ENST00000539533 EDDM13A0A1B0GTR0 161 aa16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 HDAC3O15379 428 aa16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 ITGB6P18564 788 aa16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 XPAP23025 273 aaPredicted RBP16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 PPARGP37231 505 aaPredicted RBP16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 IL12RB1P42701 662 aa16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 CLCN7P51798 805 aa16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 PRKAA2P54646 552 aa16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 PTPN5P54829 565 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms