RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 P2RY6Q15077 328 aa4.36□□□□□ -1.71
CCDC7-209ENST00000539197 TEAD2Q15562 447 aa4.36□□□□□ -1.71
CCDC7-209ENST00000539197 CYP4A22Q5TCH4 519 aa4.36□□□□□ -1.71
CCDC7-209ENST00000539197 CCDC190Q86UF4 302 aa4.36□□□□□ -1.71
CCDC7-209ENST00000539197 GPALPP1Q8IXQ4 340 aa4.36□□□□□ -1.71
CCDC7-209ENST00000539197 ANKRD42Q8N9B4 389 aa4.36□□□□□ -1.71
CCDC7-209ENST00000539197 ST8SIA4Q92187 359 aa4.36□□□□□ -1.71
CCDC7-209ENST00000539197 MAGED4Q96JG8 741 aa4.36□□□□□ -1.71
CCDC7-209ENST00000539197 RCC2Q9P258 522 aaKnown RBP4.36□□□□□ -1.71
CCDC7-209ENST00000539197 FBXW11Q9UKB1 542 aa4.36□□□□□ -1.71
CCDC7-209ENST00000539197 R3HDM2Q9Y2K5 976 aaKnown RBP4.36□□□□□ -1.71
CCDC7-209ENST00000539197 AGRNO00468 2067 aa4.35□□□□□ -1.71
CCDC7-209ENST00000539197 CCDC196A0A1B0GTZ2 297 aa4.35□□□□□ -1.71
CCDC7-209ENST00000539197 A0A1W2PQF6 199 aa4.35□□□□□ -1.71
CCDC7-209ENST00000539197 TMEM189-UBE2V1I3L0A0 370 aa4.35□□□□□ -1.71
CCDC7-209ENST00000539197 MAP2K7O14733 419 aa4.35□□□□□ -1.71
CCDC7-209ENST00000539197 ZBTB43O43298 467 aa4.35□□□□□ -1.71
CCDC7-209ENST00000539197 TUBP50607 506 aa4.35□□□□□ -1.71
CCDC7-209ENST00000539197 TMEM115Q12893 351 aaPredicted RBP4.35□□□□□ -1.71
CCDC7-209ENST00000539197 UBE2V1Q13404 147 aa4.35□□□□□ -1.71
CCDC7-209ENST00000539197 HNRNPDQ14103 355 aaKnown RBP4.35□□□□□ -1.71
CCDC7-209ENST00000539197 FBXL16Q8N461 479 aa4.35□□□□□ -1.71
CCDC7-209ENST00000539197 DNAJC22Q8N4W6 341 aa4.35□□□□□ -1.71
CCDC7-209ENST00000539197 TMEM178AQ8NBL3 297 aa4.35□□□□□ -1.71
CCDC7-209ENST00000539197 OMA1Q96E52 524 aa4.35□□□□□ -1.71
CCDC7-209ENST00000539197 STRA6Q9BX79 667 aa4.35□□□□□ -1.71
CCDC7-209ENST00000539197 RRN3Q9NYV6 651 aa4.35□□□□□ -1.71
CCDC7-209ENST00000539197 MOB4Q9Y3A3 225 aa4.35□□□□□ -1.71
CCDC7-209ENST00000539197 ARHGEF40Q8TER5 1519 aa4.35□□□□□ -1.71
CCDC7-209ENST00000539197 IGLV9-49A0A0B4J1Y8 123 aa4.34□□□□□ -1.71
CCDC7-209ENST00000539197 A8MU10 97 aa4.34□□□□□ -1.71
CCDC7-209ENST00000539197 J3QR06 171 aa4.34□□□□□ -1.71
CCDC7-209ENST00000539197 DNM1LO00429 736 aa4.34□□□□□ -1.71
CCDC7-209ENST00000539197 HOXC11O43248 304 aaPredicted RBP4.34□□□□□ -1.71
CCDC7-209ENST00000539197 SLC25A12O75746 678 aa4.34□□□□□ -1.71
CCDC7-209ENST00000539197 HSD3B1P14060 373 aa4.34□□□□□ -1.71
CCDC7-209ENST00000539197 RARSP54136 660 aaKnown RBP4.34□□□□□ -1.71
CCDC7-209ENST00000539197 GRAPQ13588 217 aa4.34□□□□□ -1.71
CCDC7-209ENST00000539197 DPCR1Q3MIW9 517 aa4.34□□□□□ -1.71
CCDC7-209ENST00000539197 FASTKD1Q53R41 847 aaKnown RBP4.34□□□□□ -1.71
CCDC7-209ENST00000539197 SEPT14Q6ZU15 432 aa4.34□□□□□ -1.71
CCDC7-209ENST00000539197 DENND5BQ6ZUT9 1274 aa4.34□□□□□ -1.71
CCDC7-209ENST00000539197 OR8K5Q8NH50 307 aa4.34□□□□□ -1.71
CCDC7-209ENST00000539197 SMARCE1Q969G3 411 aa4.34□□□□□ -1.71
CCDC7-209ENST00000539197 P2RY12Q9H244 342 aa4.34□□□□□ -1.71
CCDC7-209ENST00000539197 SLC7A7Q9UM01 511 aa4.34□□□□□ -1.71
CCDC7-209ENST00000539197 RRN3P2A6NIE6 340 aa4.33□□□□□ -1.72
CCDC7-209ENST00000539197 DAB1O75553 588 aa4.33□□□□□ -1.72
CCDC7-209ENST00000539197 PBX3P40426 434 aa4.33□□□□□ -1.72
CCDC7-209ENST00000539197 TAS2R40P59535 323 aa4.33□□□□□ -1.72
CCDC7-209ENST00000539197 ADIPOQQ15848 244 aa4.33□□□□□ -1.72
CCDC7-209ENST00000539197 CCNG2Q16589 344 aa4.33□□□□□ -1.72
CCDC7-209ENST00000539197 GLIPR1L2Q4G1C9 344 aa4.33□□□□□ -1.72
CCDC7-209ENST00000539197 PAQR6Q6TCH4 344 aa4.33□□□□□ -1.72
CCDC7-209ENST00000539197 IL27RAQ6UWB1 636 aa4.33□□□□□ -1.72
CCDC7-209ENST00000539197 CEP97Q8IW35 865 aa4.33□□□□□ -1.72
CCDC7-209ENST00000539197 KBTBD8Q8NFY9 601 aa4.33□□□□□ -1.72
CCDC7-209ENST00000539197 OR2T11Q8NH01 316 aa4.33□□□□□ -1.72
CCDC7-209ENST00000539197 ZFAND2BQ8WV99 257 aa4.33□□□□□ -1.72
CCDC7-209ENST00000539197 INTS12Q96CB8 462 aaKnown RBP4.33□□□□□ -1.72
CCDC7-209ENST00000539197 WDFY2Q96P53 400 aa4.33□□□□□ -1.72
CCDC7-209ENST00000539197 POLR1BQ9H9Y6 1135 aa4.33□□□□□ -1.72
CCDC7-209ENST00000539197 EPB41L5Q9HCM4 733 aa4.33□□□□□ -1.72
CCDC7-209ENST00000539197 OLFML3Q9NRN5 406 aa4.33□□□□□ -1.72
CCDC7-209ENST00000539197 FLRT3Q9NZU0 649 aa4.33□□□□□ -1.72
CCDC7-209ENST00000539197 LRWD1Q9UFC0 647 aa4.33□□□□□ -1.72
CCDC7-209ENST00000539197 DGKBQ9Y6T7 804 aa4.33□□□□□ -1.72
CCDC7-209ENST00000539197 NOTCH2Q04721 2471 aa4.33□□□□□ -1.72
CCDC7-209ENST00000539197 ZNF318Q5VUA4 2279 aa4.32□□□□□ -1.72
CCDC7-209ENST00000539197 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.32□□□□□ -1.72
CCDC7-209ENST00000539197 CDC123O75794 336 aaPredicted RBP4.32□□□□□ -1.72
CCDC7-209ENST00000539197 ACP2P11117 423 aa4.32□□□□□ -1.72
CCDC7-209ENST00000539197 RPS18P62269 152 aaKnown RBP4.32□□□□□ -1.72
CCDC7-209ENST00000539197 OLR1P78380 273 aa4.32□□□□□ -1.72
CCDC7-209ENST00000539197 PEX6Q13608 980 aa4.32□□□□□ -1.72
CCDC7-209ENST00000539197 RAPSNQ13702 412 aa4.32□□□□□ -1.72
CCDC7-209ENST00000539197 MVPQ14764 893 aaKnown RBP4.32□□□□□ -1.72
CCDC7-209ENST00000539197 SGSM1Q2NKQ1 1148 aa4.32□□□□□ -1.72
CCDC7-209ENST00000539197 PSRC1Q6PGN9 363 aaPredicted RBP4.32□□□□□ -1.72
CCDC7-209ENST00000539197 INO80CQ6PI98 192 aaPredicted RBP4.32□□□□□ -1.72
CCDC7-209ENST00000539197 ZNF534Q76KX8 674 aa4.32□□□□□ -1.72
CCDC7-209ENST00000539197 RSRC2Q7L4I2 434 aaKnown RBP4.32□□□□□ -1.72
CCDC7-209ENST00000539197 LINC00612Q8N6U2 182 aa4.32□□□□□ -1.72
CCDC7-209ENST00000539197 FAM149B1Q96BN6 582 aa4.32□□□□□ -1.72
CCDC7-209ENST00000539197 PERPQ96FX8 193 aa4.32□□□□□ -1.72
CCDC7-209ENST00000539197 SEPT5Q99719 369 aaPredicted RBP4.32□□□□□ -1.72
CCDC7-209ENST00000539197 INTS9Q9NV88 658 aaKnown RBP4.32□□□□□ -1.72
CCDC7-209ENST00000539197 LIMA1Q9UHB6 759 aaKnown RBP4.32□□□□□ -1.72
CCDC7-209ENST00000539197 TSPYL4Q9UJ04 414 aa4.32□□□□□ -1.72
CCDC7-209ENST00000539197 TDRD15B5MCY1 1934 aaKnown RBP4.31□□□□□ -1.72
CCDC7-209ENST00000539197 NPIPB15A6NHN6 443 aaPredicted RBP4.31□□□□□ -1.72
CCDC7-209ENST00000539197 SEC14L2O76054 403 aa4.31□□□□□ -1.72
CCDC7-209ENST00000539197 CDR2Q01850 454 aa4.31□□□□□ -1.72
CCDC7-209ENST00000539197 SOWAHCQ53LP3 525 aaPredicted RBP4.31□□□□□ -1.72
CCDC7-209ENST00000539197 LRRTM1Q86UE6 522 aa4.31□□□□□ -1.72
CCDC7-209ENST00000539197 HEATR4Q86WZ0 1026 aa4.31□□□□□ -1.72
CCDC7-209ENST00000539197 LSMEM2Q8N112 164 aa4.31□□□□□ -1.72
CCDC7-209ENST00000539197 L3MBTL4Q8NA19 623 aa4.31□□□□□ -1.72
CCDC7-209ENST00000539197 GSDMBQ8TAX9 411 aa4.31□□□□□ -1.72
CCDC7-209ENST00000539197 SUSD6Q92537 303 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms