RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 CLDN4O14493 209 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 SCO2O43819 266 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 SSX5O60225 188 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 SEC22BO75396 215 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 RAD51DO75771 328 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 STARD3NLO95772 234 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 H2AFZP0C0S5 128 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 UNGP13051 313 aaPredicted RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 ELAVL4P26378 380 aaKnown RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 HNRNPH1P31943 449 aaKnown RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 RFX2P48378 723 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 PEX5P50542 639 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 HNRNPA3P51991 378 aaKnown RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 CDH13P55290 713 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 CDK3Q00526 305 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 HSPB3Q12988 150 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 DRAP1Q14919 205 aaPredicted RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 MEP1BQ16820 701 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 KBTBD12Q3ZCT8 623 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 SLC9C1Q4G0N8 1177 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 PRAMEF17Q5VTA0 474 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 OTUD1Q5VV17 481 aaPredicted RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 DUS1LQ6P1R4 473 aaKnown RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 CDHR3Q6ZTQ4 885 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 INTS8Q75QN2 995 aaKnown RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 SNX32Q86XE0 403 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 TEX11Q8IYF3 940 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 MMP21Q8N119 569 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 NDUFAF2Q8N183 169 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 CLIP4Q8N3C7 705 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 HORMAD2Q8N7B1 307 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 MRPL43Q8N983 215 aaKnown RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 FAM133AQ8N9E0 248 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 SPATA22Q8NHS9 363 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 ARRDC2Q8TBH0 407 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 TAS1R2Q8TE23 839 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 GIMAP1Q8WWP7 306 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 SMPDL3BQ92485 455 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 ZNF622Q969S3 477 aaKnown RBP eCLIP1.03□□□□□ -2.242e-7■□□□□ 8.5
HIF1A-204ENST00000539097 SLAMF9Q96A28 289 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 JAKMIP2Q96AA8 810 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 INPP5KQ9BT40 448 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 CPVLQ9H3G5 476 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 CATSPERBQ9H7T0 1116 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 COQ3Q9NZJ6 369 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 OGFRQ9NZT2 677 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 GALPQ9UBC7 116 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 ZNF70Q9UC06 446 aaPredicted RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 TESQ9UGI8 421 aaKnown RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 LIMA1Q9UHB6 759 aaKnown RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 UBQLN2Q9UHD9 624 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 ODF2LQ9ULJ1 636 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 PCDHA7Q9UN72 937 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 SLCO1B1Q9Y6L6 691 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 HEG1Q9ULI3 1381 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 TTC3P53804 2025 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 NPIPA3F8WFD2 350 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 CCL24O00175 119 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 TRAFD1O14545 582 aaPredicted RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 CTDSP2O14595 271 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 AVILO75366 819 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 RFPL2O75678 378 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 FGBP02675 491 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 CXCL10P02778 98 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 SLPIP03973 132 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 LBPP18428 481 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 MPZP25189 248 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 MT3P25713 68 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 PPARGP37231 505 aaPredicted RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 BUD31P41223 144 aaPredicted RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 ARHGAP25P42331 645 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 PDLIM4P50479 330 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 GPR143P51810 404 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 MFAP4P55083 255 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 PPP2R2BQ00005 443 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 PLIN5Q00G26 463 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 PLP2Q04941 152 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 MTA1Q13330 715 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 GRAPQ13588 217 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 SLC39A14Q15043 492 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 TMEM266Q2M3C6 531 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 KRTAP15-1Q3LI76 137 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 TDRD12Q587J7 1177 aaKnown RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 SLC29A4Q7RTT9 530 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 CCDC25Q86WR0 208 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 NRROSQ86YC3 692 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 ANKRD13BQ86YJ7 626 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 RASGEF1CQ8N431 466 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 FAM89BQ8N5H3 189 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 PARP16Q8N5Y8 322 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 METTL27Q8N6F8 245 aaPredicted RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 ENGASEQ8NFI3 743 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 GJC3Q8NFK1 279 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 CFAP61Q8NHU2 1237 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 HUS1BQ8NHY5 278 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 MRPS27Q92552 414 aaKnown RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 SPACA9Q96E40 222 aaPredicted RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 CDCA5Q96FF9 252 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 APOLD1Q96LR9 279 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 NUDCD1Q96RS6 583 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms