RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 ARRB1P49407 418 aaPredicted RBP5.29□□□□□ -1.56
LRP6-203ENST00000538239 TAS2R50P59544 299 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 DEFA1P59665 94 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 DEFA3P59666 94 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 POU5F1Q01860 360 aaKnown RBP5.29□□□□□ -1.56
LRP6-203ENST00000538239 COX10Q12887 443 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 INAQ16352 499 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 TBC1D25Q3MII6 688 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 PIK3R6Q5UE93 754 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 ABHD13Q7L211 337 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 ARCQ7LC44 396 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 TEX47Q8TBZ9 253 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 MAGEE2Q8TD90 523 aaPredicted RBP5.29□□□□□ -1.56
LRP6-203ENST00000538239 RCN3Q96D15 328 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 ZSCAN5AQ9BUG6 496 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 EGFL7Q9UHF1 273 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 ADAM30Q9UKF2 790 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 OGDHLQ9ULD0 1010 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 A0A0J9YYE9 177 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 A0A1W2PP55 124 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 TRIM43BA6NCK2 446 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 PIRO00625 290 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 CNTN5O94779 1100 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 OR4F21O95013 312 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 RB1P06400 928 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 IL1R2P27930 398 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 TPP2P29144 1249 aaPredicted RBP5.29□□□□□ -1.56
LRP6-203ENST00000538239 HOXC12P31275 282 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 CEP78Q5JTW2 689 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 SPATA19Q7Z5L4 167 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 SLC9B2Q86UD5 537 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 JAZF1Q86VZ6 243 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 TMEM130Q8N3G9 435 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 SLC44A1Q8WWI5 657 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 SLC38A2Q96QD8 506 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 C9orf16Q9BUW7 83 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 HERC2P3Q9BVR0 1158 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 C12orf65Q9H3J6 166 aaKnown RBP5.29□□□□□ -1.56
LRP6-203ENST00000538239 ELAC1Q9H777 363 aaKnown RBP5.29□□□□□ -1.56
LRP6-203ENST00000538239 ANKHQ9HCJ1 492 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 ZDHHC3Q9NYG2 299 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 RAB21Q9UL25 225 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 RGSL1A5PLK6 1076 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 FOXO6A8MYZ6 492 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 HDAC3O15379 428 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 CLOCKO15516 846 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 NDUFS4O43181 175 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 DLGAP3O95886 979 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 CST1P01037 141 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 ATP1B2P14415 290 aaPredicted RBP5.29□□□□□ -1.56
LRP6-203ENST00000538239 CASRP41180 1078 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 NEDD8Q15843 81 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 TIGD2Q4W5G0 525 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 INO80DQ53TQ3 878 aaPredicted RBP5.29□□□□□ -1.56
LRP6-203ENST00000538239 BTN2A1Q7KYR7 527 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.29□□□□□ -1.56
LRP6-203ENST00000538239 SMYD1Q8NB12 490 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 UXS1Q8NBZ7 420 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 ZMIZ2Q8NF64 920 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 NDC1Q9BTX1 674 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 RAB11FIP5Q9BXF6 653 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 SUV39H1O43463 412 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 KIF1CO43896 1103 aaKnown RBP5.29□□□□□ -1.56
LRP6-203ENST00000538239 NBNO60934 754 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 UGT2B17O75795 530 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 ACADSP16219 412 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 CRHR1P34998 444 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 TALDO1P37837 337 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 VIPR2P41587 438 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 CASP9P55211 416 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 CDC42P60953 191 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 SOX4Q06945 474 aaPredicted RBP5.29□□□□□ -1.56
LRP6-203ENST00000538239 PPIDQ08752 370 aaKnown RBP5.29□□□□□ -1.56
LRP6-203ENST00000538239 ZYG11AQ6WRX3 759 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 ZNF662Q6ZS27 426 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 LPCAT2Q7L5N7 544 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 MPP5Q8N3R9 675 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 SETD9Q8NE22 299 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 MAPK15Q8TD08 544 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 SLC35F5Q8WV83 523 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 ZNF599Q96NL3 588 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 WDR55Q9H6Y2 383 aaPredicted RBP5.29□□□□□ -1.56
LRP6-203ENST00000538239 SLC17A6Q9P2U8 582 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 CD207Q9UJ71 328 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 ATXN2Q99700 1313 aaKnown RBP5.29□□□□□ -1.56
LRP6-203ENST00000538239 SMIM31A0A1B0GVY4 71 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 TMEM150CB9EJG8 249 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 ESR1P03372 595 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 GIMD1P0DJR0 217 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 CCR8P51685 355 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 POLR2JP52435 117 aaKnown RBP5.29□□□□□ -1.56
LRP6-203ENST00000538239 PRRT3Q5FWE3 981 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 RALGPS2Q86X27 583 aaPredicted RBP5.29□□□□□ -1.56
LRP6-203ENST00000538239 METTL27Q8N6F8 245 aaPredicted RBP5.29□□□□□ -1.56
LRP6-203ENST00000538239 NTAN1Q96AB6 310 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 TPSD1Q9BZJ3 242 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 SLC2A4RGQ9NR83 387 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 INTS10Q9NVR2 710 aaKnown RBP5.29□□□□□ -1.56
LRP6-203ENST00000538239 SEC14L3Q9UDX4 400 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 IKZF3Q9UKT9 509 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms