RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 LILRB2Q8N423 598 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 CCNYL1Q8N7R7 359 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 OR8K5Q8NH50 307 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 SLC22A17Q8WUG5 538 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 OPTCQ9UBM4 332 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 FIS1Q9Y3D6 152 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 HPRP00739 348 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 HTR7P34969 479 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 PARP15Q460N3 678 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 RAP1GAP2Q684P5 730 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 NAPRTQ6XQN6 538 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 VN1R5Q7Z5H4 357 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 RETREG3Q86VR2 466 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 ZDHHC13Q8IUH4 622 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 MPP5Q8N3R9 675 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 CHDHQ8NE62 594 aaPredicted RBP10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 COLEC11Q9BWP8 271 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 CCNB1IP1Q9NPC3 277 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 FAM49BQ9NUQ9 324 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 NUFIP1Q9UHK0 495 aaKnown RBP10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 METTL15A6NJ78 407 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 GNGT2O14610 69 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 PI15O43692 258 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 PSMD10O75832 226 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 ZNF865P0CJ78 1059 aaPredicted RBP10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 POLD2P49005 469 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 CLCN3P51790 818 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 AKR1D1P51857 326 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 GPR50Q13585 617 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 ZNF699Q32M78 642 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 PITRM1Q5JRX3 1037 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 CYS1Q717R9 158 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 SETD9Q8NE22 299 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 RNF170Q96K19 258 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 ZNF300Q96RE9 604 aaPredicted RBP10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 CPNE1Q99829 537 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 OR51B5Q9H339 312 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 DHX35Q9H5Z1 703 aaKnown RBP10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 TASP1Q9H6P5 420 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 MCCC2Q9HCC0 563 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 NUDT5Q9UKK9 219 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 SNX6Q9UNH7 406 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 SLC1A7O00341 560 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 ARPC2O15144 300 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 GRID2O43424 1007 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 CD36P16671 472 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 NPR3P17342 541 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 AXLP30530 894 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 TIE1P35590 1138 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 NPY2RP49146 381 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 ARHGDIAP52565 204 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 FRG1Q14331 258 aaKnown RBP10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 KIF19Q2TAC6 998 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 SPATS1Q496A3 300 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 EID3Q8N140 333 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 GLB1L3Q8NCI6 653 aaPredicted RBP10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 TBATAQ96M53 351 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 SLC9A7Q96T83 725 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 SEPHS2Q99611 448 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 SLC6A17Q9H1V8 727 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 IFT46Q9NQC8 304 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 OXSMQ9NWU1 459 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 DCAF16Q9NXF7 216 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 FBXL12Q9NXK8 326 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 TBX20Q9UMR3 447 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 NDUFAF1Q9Y375 327 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 COQ4Q9Y3A0 265 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 PCDHGB2Q9Y5G2 931 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 A0A096LPK6 155 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 A0A0B4J203 849 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 LINC00862A6NCI5 91 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 AIREO43918 545 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 MAGEA11P43364 429 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 RAB25P57735 213 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 IL5RAQ01344 420 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 EMX1Q04741 257 aaPredicted RBP10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 QPRTQ15274 297 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 DUOXA2Q1HG44 320 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 JADE1Q6IE81 842 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 FIP1L1Q6UN15 594 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 PIGZQ86VD9 579 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 COMMD7Q86VX2 200 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 KIAA1958Q8N8K9 716 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 ELMO2Q96JJ3 720 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 RNF145Q96MT1 663 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 OSMRQ99650 979 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 IER2Q9BTL4 223 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 SPATA9Q9BWV2 254 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 SLC22A4Q9H015 551 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 IL23AQ9NPF7 189 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 TMEM5Q9Y2B1 443 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 LYVE1Q9Y5Y7 322 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 ZNF487B1APH4 448 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 ATG13O75143 517 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 CCNYL3P0C7X3 344 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 ACO1P21399 889 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 RECQLP46063 649 aaPredicted RBP10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 TPMTP51580 245 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 RUNX1T1Q06455 604 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms