RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 AKT3Q9Y243 479 aa5.76□□□□□ -1.49
CHD4-206ENST00000536999 TDRKHQ9Y2W6 561 aaKnown RBP5.76□□□□□ -1.49
CHD4-206ENST00000536999 PCDHGA11Q9Y5H2 935 aa5.76□□□□□ -1.49
CHD4-206ENST00000536999 PHIPQ8WWQ0 1821 aa5.76□□□□□ -1.49
CHD4-206ENST00000536999 ZNFX1Q9P2E3 1918 aaKnown RBP5.76□□□□□ -1.49
CHD4-206ENST00000536999 USP24Q9UPU5 2620 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 LCHNA4D1U4 455 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 SPDYE16A6NNV3 312 aaPredicted RBP5.75□□□□□ -1.49
CHD4-206ENST00000536999 CENPXA8MT69 81 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 A8MVJ9 347 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 H3BMM5 538 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 KCNK1O00180 336 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 SLC28A1O00337 649 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 PIRO00625 290 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 NME4O00746 187 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 SNPHO15079 494 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 RAD51BO15315 384 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 RGS14O43566 566 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 SYNCRIPO60506 623 aaKnown RBP5.75□□□□□ -1.49
CHD4-206ENST00000536999 RFPL2O75678 378 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 UPK1BO75841 260 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 RSL1D1O76021 490 aaKnown RBP5.75□□□□□ -1.49
CHD4-206ENST00000536999 PDE9AO76083 593 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 MYO1DO94832 1006 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 WDR47O94967 919 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 EPN2O95208 641 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 C22orf31O95567 290 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 NDST3O95803 873 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 CST1P01037 141 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 AMHP03971 560 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 FUCA1P04066 466 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 S100BP04271 92 aaPredicted RBP5.75□□□□□ -1.49
CHD4-206ENST00000536999 FGF1P05230 155 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 JUNP05412 331 aaKnown RBP5.75□□□□□ -1.49
CHD4-206ENST00000536999 ACPPP15309 386 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 ARF4P18085 180 aaPredicted RBP5.75□□□□□ -1.49
CHD4-206ENST00000536999 M6PRP20645 277 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 TGM1P22735 817 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 PPIBP23284 216 aaKnown RBP5.75□□□□□ -1.49
CHD4-206ENST00000536999 NMBRP28336 390 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 RPL9P32969 192 aaKnown RBP5.75□□□□□ -1.49
CHD4-206ENST00000536999 MTHFRP42898 656 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 GLRBP48167 497 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 PPP3CCP48454 512 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 CLK1P49759 484 aaKnown RBP5.75□□□□□ -1.49
CHD4-206ENST00000536999 KPNA1P52294 538 aaPredicted RBP5.75□□□□□ -1.49
CHD4-206ENST00000536999 NRLP54845 237 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 CDH15P55291 814 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 CCL23P55773 120 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 IRF9Q00978 393 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 SP2Q02086 613 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 CLCQ05315 142 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 NME3Q13232 169 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 PEX6Q13608 980 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 ELOAQ14241 798 aaKnown RBP5.75□□□□□ -1.49
CHD4-206ENST00000536999 PUM1Q14671 1186 aaKnown RBP eCLIP5.75□□□□□ -1.49
CHD4-206ENST00000536999 ANGPT1Q15389 498 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 DPY19L1Q2PZI1 675 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 TYSND1Q2T9J0 566 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 ZNF404Q494X3 552 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 VPS26BQ4G0F5 336 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 SEZ6Q53EL9 994 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 XKR4Q5GH76 650 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 CDKL4Q5MAI5 379 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 TSTD2Q5T7W7 516 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 CACHD1Q5VU97 1274 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 C9orf57Q5W0N0 161 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 BTBD8Q5XKL5 378 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 TRNP1Q6NT89 227 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 XKR5Q6UX68 686 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 TMEM26Q6ZUK4 368 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 R3HCC1LQ7Z5L2 792 aaKnown RBP5.75□□□□□ -1.49
CHD4-206ENST00000536999 DNAJB7Q7Z6W7 309 aaPredicted RBP5.75□□□□□ -1.49
CHD4-206ENST00000536999 ISCA2Q86U28 154 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 STK32CQ86UX6 486 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 PIGZQ86VD9 579 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 METTL23Q86XA0 190 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 RNF135Q8IUD6 432 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 CILP2Q8IUL8 1156 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 ZC3H7AQ8IWR0 971 aaKnown RBP5.75□□□□□ -1.49
CHD4-206ENST00000536999 RIMKLAQ8IXN7 391 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 FAM126BQ8IXS8 530 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 DEPDC4Q8N2C3 294 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 FBXO39Q8N4B4 442 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 KIAA1958Q8N8K9 716 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 ARL10Q8N8L6 244 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 C12orf29Q8N999 325 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 SIMC1Q8NDZ2 872 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 BPIFB6Q8NFQ5 453 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 PPTC7Q8NI37 304 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 PROX1Q92786 737 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 HPS1Q92902 700 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 GLMNQ92990 594 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 NCLNQ969V3 563 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 BIRC7Q96CA5 298 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 ZHX1-C8orf76Q96EF9 292 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 SMARCD1Q96GM5 515 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 ATXN7L3BQ96GX2 97 aa5.75□□□□□ -1.49
CHD4-206ENST00000536999 REXO5Q96IC2 774 aaKnown RBP5.75□□□□□ -1.49
CHD4-206ENST00000536999 METTL2AQ96IZ6 378 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms