RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 MLLT6P55198 1093 aaPredicted RBP13.81□□□□□ -0.2
LIG1-203ENST00000536218 FAM189BP81408 668 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 CDC20Q12834 499 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 CDH17Q12864 832 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 CDK10Q15131 360 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 ADPRMQ3LIE5 342 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 PXDC1Q5TGL8 231 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 NAPEPLDQ6IQ20 393 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 FSTL4Q6MZW2 842 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 PRSS55Q6UWB4 352 aaPredicted RBP13.81□□□□□ -0.2
LIG1-203ENST00000536218 TAS1R1Q7RTX1 841 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 PNPLA1Q8N8W4 532 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 FAM83FQ8NEG4 500 aaPredicted RBP13.81□□□□□ -0.2
LIG1-203ENST00000536218 OR5H6Q8NGV6 325 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 RMDN1Q96DB5 314 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 SERPINB11Q96P15 392 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 VAT1Q99536 393 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 YTHDF1Q9BYJ9 559 aaKnown RBP13.81□□□□□ -0.2
LIG1-203ENST00000536218 LTB4R2Q9NPC1 389 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 TMEM161AQ9NX61 479 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 KCNN3Q9UGI6 736 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 ARHGAP33O14559 1287 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 UPK1BO75841 260 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 HLA-DQB2P05538 268 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 IFI30P13284 250 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 GLULP15104 373 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 RPL17P18621 184 aaKnown RBP13.81□□□□□ -0.2
LIG1-203ENST00000536218 ENPP1P22413 925 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 YWHAQP27348 245 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 PTGS2P35354 604 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 SLC11A1P49279 550 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 ALFQ53S48 1182 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 RAP1GAP2Q684P5 730 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 DEFB128Q7Z7B8 93 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 TMEM135Q86UB9 458 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 TP53I13Q8NBR0 393 aaPredicted RBP13.81□□□□□ -0.2
LIG1-203ENST00000536218 BRSK1Q8TDC3 778 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 KCTD14Q9BQ13 255 aaPredicted RBP13.81□□□□□ -0.2
LIG1-203ENST00000536218 TOR4AQ9NXH8 423 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 CD300AQ9UGN4 299 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 SLC39A10Q9ULF5 831 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 PMF1-BGLAPU3KQ54 211 aa13.81□□□□□ -0.2
LIG1-203ENST00000536218 SLC12A8A0AV02 714 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 NDUFS2O75306 463 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 MTHFD1P11586 935 aaKnown RBP13.8□□□□□ -0.2
LIG1-203ENST00000536218 CCNCP24863 283 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 GSTM2P28161 218 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 AVPR1AP37288 418 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 HTR2BP41595 481 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 NCS1P62166 190 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 GPLD1P80108 840 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 EIF4EBP2Q13542 120 aaPredicted RBP13.8□□□□□ -0.2
LIG1-203ENST00000536218 CYS1Q717R9 158 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 HHIPL1Q96JK4 782 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 FSD1LQ9BXM9 530 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 ACE2Q9BYF1 805 aaPredicted RBP13.8□□□□□ -0.2
LIG1-203ENST00000536218 GLOD4Q9HC38 313 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 C16orf96A6NNT2 1141 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 A8MX80 341 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 C9JVG2 144 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 J3KR12 359 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 hCG_2039718K7EN88 272 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 ZW10O43264 779 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 TRIM16O95361 564 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 CYP2C18P33260 490 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 SPRP35270 261 aaPredicted RBP13.8□□□□□ -0.2
LIG1-203ENST00000536218 GPNMBQ14956 572 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 MEP1AQ16819 746 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 TCTN1Q2MV58 587 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 RTP2Q5QGT7 225 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 TBPL2Q6SJ96 375 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 CLEC4FQ8N1N0 589 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 PROX1Q92786 737 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 BIRC7Q96CA5 298 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 LRCH3Q96II8 777 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 CPNE1Q99829 537 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 TRIM15Q9C019 465 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 FBXO44Q9H4M3 255 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 NT5MQ9NPB1 228 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 SCML2Q9UQR0 700 aa13.8□□□□□ -0.2
LIG1-203ENST00000536218 PDE4DIPQ5VU43 2346 aa13.79□□□□□ -0.2
LIG1-203ENST00000536218 SNRPB2P08579 225 aaKnown RBP13.79□□□□□ -0.2
LIG1-203ENST00000536218 IL12AP29459 219 aa13.79□□□□□ -0.2
LIG1-203ENST00000536218 NPY2RP49146 381 aa13.79□□□□□ -0.2
LIG1-203ENST00000536218 CTBP1Q13363 440 aa13.79□□□□□ -0.2
LIG1-203ENST00000536218 CAPRIN1Q14444 709 aaKnown RBP13.79□□□□□ -0.2
LIG1-203ENST00000536218 ESRP1Q6NXG1 681 aaKnown RBP13.79□□□□□ -0.2
LIG1-203ENST00000536218 SLC22A15Q8IZD6 547 aa13.79□□□□□ -0.2
LIG1-203ENST00000536218 TTC16Q8NEE8 873 aa13.79□□□□□ -0.2
LIG1-203ENST00000536218 TBL1YQ9BQ87 522 aa13.79□□□□□ -0.2
LIG1-203ENST00000536218 IL22Q9GZX6 179 aa13.79□□□□□ -0.2
LIG1-203ENST00000536218 DSN1Q9H410 356 aa13.79□□□□□ -0.2
LIG1-203ENST00000536218 TOR3AQ9H497 397 aa13.79□□□□□ -0.2
LIG1-203ENST00000536218 OXSMQ9NWU1 459 aa13.79□□□□□ -0.2
LIG1-203ENST00000536218 SLC2A6Q9UGQ3 507 aa13.79□□□□□ -0.2
LIG1-203ENST00000536218 ERI2A8K979 691 aaKnown RBP13.79□□□□□ -0.2
LIG1-203ENST00000536218 AGRPO00253 132 aa13.79□□□□□ -0.2
LIG1-203ENST00000536218 MATN3O15232 486 aa13.79□□□□□ -0.2
LIG1-203ENST00000536218 HAPLN1P10915 354 aaPredicted RBP13.79□□□□□ -0.2
LIG1-203ENST00000536218 CRHBPP24387 322 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms