RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 SMARCD1Q96GM5 515 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 AHCYL2Q96HN2 611 aaKnown RBP3.93□□□□□ -1.78
YBX3-205ENST00000536107 TBATAQ96M53 351 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 SOX7Q9BT81 388 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 WACQ9BTA9 647 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 SPATA9Q9BWV2 254 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 KRTAP4-4Q9BYR3 166 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 ACTL8Q9H568 366 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 APMAPQ9HDC9 416 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 PDE7BQ9NP56 450 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 DDX19AQ9NUU7 478 aaKnown RBP3.93□□□□□ -1.78
YBX3-205ENST00000536107 IL37Q9NZH6 218 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 AGO2Q9UKV8 859 aaKnown RBP3.93□□□□□ -1.78
YBX3-205ENST00000536107 ITGA11Q9UKX5 1188 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 PADI1Q9ULC6 663 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 DNM3Q9UQ16 869 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 SCML2Q9UQR0 700 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 BTRCQ9Y297 605 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 PLEKHA6Q9Y2H5 1048 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 TMEM184BQ9Y519 407 aaPredicted RBP3.93□□□□□ -1.78
YBX3-205ENST00000536107 ABCA4P78363 2273 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 NSD1Q96L73 2696 aaPredicted RBP3.93□□□□□ -1.78
YBX3-205ENST00000536107 TLN2Q9Y4G6 2542 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 CKAP5Q14008 2032 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 FAM92AA1XBS5 289 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 VWA3AA6NCI4 1184 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 E2F3O00716 465 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 NEMP1O14524 444 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 CPLX1O14810 134 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 TP73O15350 636 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 KLF4O43474 513 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 NUDT21O43809 227 aaKnown RBP3.92□□□□□ -1.78
YBX3-205ENST00000536107 PRPF6O94906 941 aaKnown RBP3.92□□□□□ -1.78
YBX3-205ENST00000536107 TNFP01375 233 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 THRAP10827 490 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 IDEP14735 1019 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 CD1CP29017 333 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 SPAM1P38567 509 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 STK19P49842 368 aaPredicted RBP3.92□□□□□ -1.78
YBX3-205ENST00000536107 HK3P52790 923 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 RCAN1P53805 252 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 FOXG1P55316 489 aaPredicted RBP3.92□□□□□ -1.78
YBX3-205ENST00000536107 RPS18P62269 152 aaKnown RBP3.92□□□□□ -1.78
YBX3-205ENST00000536107 RPS15P62841 145 aaKnown RBP3.92□□□□□ -1.78
YBX3-205ENST00000536107 CCT2P78371 535 aaKnown RBP3.92□□□□□ -1.78
YBX3-205ENST00000536107 SSBP2P81877 361 aaPredicted RBP3.92□□□□□ -1.78
YBX3-205ENST00000536107 MYBPHQ13203 477 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 FHL1Q13642 323 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 ZRSR1Q15695 479 aaKnown RBP3.92□□□□□ -1.78
YBX3-205ENST00000536107 UGT8Q16880 541 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 PITRM1Q5JRX3 1037 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 PIP5KL1Q5T9C9 394 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 CREB3L3Q68CJ9 461 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 KIAA1161Q6NSJ0 714 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 FAM180AQ6UWF9 173 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 ENPP7Q6UWV6 458 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 GFRALQ6UXV0 394 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 MMS22LQ6ZRQ5 1243 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 CUZD1Q86UP6 607 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 VPS36Q86VN1 386 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 SKAP1Q86WV1 359 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 RASGRP3Q8IV61 690 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 ATP11CQ8NB49 1132 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 PIK3C3Q8NEB9 887 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 WFDC5Q8TCV5 224 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 CT55Q8WUE5 264 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 FAR1Q8WVX9 515 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 DDB2Q92466 427 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 FAM131CQ96AQ9 280 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 RGMAQ96B86 450 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 ELMO2Q96JJ3 720 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 SECISBP2Q96T21 854 aaKnown RBP3.92□□□□□ -1.78
YBX3-205ENST00000536107 BARD1Q99728 777 aaKnown RBP3.92□□□□□ -1.78
YBX3-205ENST00000536107 FAM213AQ9BRX8 229 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 NTPCRQ9BSD7 190 aaKnown RBP3.92□□□□□ -1.78
YBX3-205ENST00000536107 TMEM121Q9BTD3 319 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 SPRY4Q9C004 299 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 FBXO8Q9NRD0 319 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 C5AR2Q9P296 337 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 LNPEPQ9UIQ6 1025 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 SLC25A13Q9UJS0 675 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 COL27A1Q8IZC6 1860 aaPredicted RBP3.92□□□□□ -1.78
YBX3-205ENST00000536107 ZNF106Q9H2Y7 1883 aaKnown RBP3.92□□□□□ -1.78
YBX3-205ENST00000536107 ANK2Q01484 3957 aa3.92□□□□□ -1.78
YBX3-205ENST00000536107 NBEAL2Q6ZNJ1 2754 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 DOCK9Q9BZ29 2069 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 MEGF8Q7Z7M0 2845 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 CUBNO60494 3623 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 TLCD2A6NGC4 264 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 IGLON5A6NGN9 336 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 FOXO6A8MYZ6 492 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 C21orf140B9A014 251 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 E9PMD0 336 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 K7ENM7 598 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 PHF1O43189 567 aaPredicted RBP3.91□□□□□ -1.78
YBX3-205ENST00000536107 PROM1O43490 865 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 CRLF1O75462 422 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 CEACAM4O75871 244 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 KIAA0754O94854 1291 aa3.91□□□□□ -1.78
YBX3-205ENST00000536107 TMEM63AO94886 807 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms