RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 PCDHGB7Q9Y5F8 929 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 SPO11Q9Y5K1 396 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 USP9XQ93008 2570 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 ZNF487B1APH4 448 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 GOLGA6L19H0YKK7 550 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 SLC35G4P0C7Q5 338 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 MTHFD1P11586 935 aaKnown RBP12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 HLA-DPA1P20036 260 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 PTGIRP43119 386 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 RRADP55042 308 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 FANCCQ00597 558 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 IL10RAQ13651 578 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 NFE2L1Q14494 772 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 GPR19Q15760 415 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 TEX44Q53QW1 395 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 TMEM220Q6QAJ8 160 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 NPNTQ6UXI9 565 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 VSIG1Q86XK7 387 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 HPS6Q86YV9 775 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 RHOT1Q8IXI2 618 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 CARFQ8N187 725 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 D2HGDHQ8N465 521 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 SLC25A41Q8N5S1 370 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 DDHD1Q8NEL9 900 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 C12orf66Q96MD2 445 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 CASS4Q9NQ75 786 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 TMEM63CQ9P1W3 806 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 SEMA5BQ9P283 1151 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 KLHL8Q9P2G9 620 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 FAM153AQ9UHL3 310 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 CAPN11Q9UMQ6 739 aa12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 CFAP20Q9Y6A4 193 aaKnown RBP12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 DNMT3AQ9Y6K1 912 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 TNRC6AQ8NDV7 1962 aaKnown RBP12.67□□□□□ -0.38
TNFRSF1A-207ENST00000535958 A1L4Q6 167 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 KLHL33A6NCF5 533 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 OR6C74A6NCV1 312 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 AURKAO14965 403 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 TMEM63AO94886 807 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 TPM3P06753 285 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 TNNT1P13805 278 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 CYP2A7P20853 494 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 LPOP22079 712 aaPredicted RBP12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 CDH3P22223 829 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 NDUFS1P28331 727 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 FNBP1LQ5T0N5 605 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 GPRC6AQ5T6X5 926 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 IZUMO3Q5VZ72 239 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 HIST2H2BCQ6DN03 193 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 CERS6Q6ZMG9 384 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 DET1Q7L5Y6 550 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 ENDOVQ8N8Q3 282 aaKnown RBP12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 RASGEF1AQ8N9B8 481 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 TFB1MQ8WVM0 346 aaKnown RBP12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 OLFM3Q96PB7 478 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 FSD1LQ9BXM9 530 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 PACSIN1Q9BY11 444 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 WWP1Q9H0M0 922 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 CHST8Q9H2A9 424 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 IL26Q9NPH9 171 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 DDX56Q9NY93 547 aaKnown RBP12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 GPR83Q9NYM4 423 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 LUZP4Q9P127 313 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 ACSL5Q9ULC5 683 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 MAP4K5Q9Y4K4 846 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 COLEC10Q9Y6Z7 277 aa12.66□□□□□ -0.38
TNFRSF1A-207ENST00000535958 SSU72P8A0A1W2PR75 194 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 GSAPA4D1B5 854 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 C9J4A7 227 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 MATN2O00339 956 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 UGT1A9O60656 530 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 SORBS2O94875 1100 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 DDAH2O95865 285 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 TMEM253P0C7T8 217 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 PYGMP11217 842 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 RALBP11234 206 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 UGT1A6P19224 532 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 NFKB1P19838 968 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 UGT1A1P22309 533 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 UGT1A4P22310 534 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 PTPN3P26045 913 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 ARCN1P48444 511 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 NR2C2P49116 596 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 CTSCP53634 463 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 GPS2Q13227 327 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 INPP5JQ15735 1006 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 SLC18A3Q16572 532 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 KYNUQ16719 465 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 FAM182AQ5T1J6 154 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 JMJD6Q6NYC1 403 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 CAVIN1Q6NZI2 390 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 DUS1LQ6P1R4 473 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 FAM83HQ6ZRV2 1179 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 B4GALNT4Q76KP1 1039 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 RAB43Q86YS6 212 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 TMEM102Q8N9M5 508 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 IPMKQ8NFU5 416 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 PRR7Q8TB68 274 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 DTX3LQ8TDB6 740 aa12.65□□□□□ -0.38
TNFRSF1A-207ENST00000535958 ZFPM2Q8WW38 1151 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms