RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 KALRNO60229 2985 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 LOC285095A0A1B0GVY8 99 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 TLCD2A6NGC4 264 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 PRR19A6NJB7 356 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 F5H423 210 aaPredicted RBP12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 APOC4-APOC2K7ER74 178 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 KDM1AO60341 852 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 CPNE3O75131 537 aaKnown RBP12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 GAS8O95995 478 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 APOC2P02655 101 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 OAS2P29728 719 aaKnown RBP12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 COPS2P61201 443 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 SH3BP2P78314 561 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 DMPKQ09013 629 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 DNASE1L3Q13609 305 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 TCEAL1Q15170 157 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 LLGL1Q15334 1064 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 SKIDA1Q1XH10 827 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 GPRC6AQ5T6X5 926 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 B4GALNT4Q76KP1 1039 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 DET1Q7L5Y6 550 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 TIPARPQ7Z3E1 657 aaKnown RBP12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 CCDC170Q8IYT3 715 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 CARFQ8N187 725 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 OR8K5Q8NH50 307 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 THAP4Q8WY91 577 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 COL26A1Q96A83 441 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 EID2BQ96D98 161 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 ABHD17AQ96GS6 310 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 QKIQ96PU8 341 aaKnown RBP eCLIP12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 FICDQ9BVA6 458 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 LHX9Q9NQ69 397 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 SIDT1Q9NXL6 827 aaKnown RBP12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 IL17CQ9P0M4 197 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 SAE1Q9UBE0 346 aaPredicted RBP12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 FAM8A1Q9UBU6 413 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 FEZ2Q9UHY8 353 aaPredicted RBP12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 SPO11Q9Y5K1 396 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 SDK2Q58EX2 2172 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 MGAQ8IWI9 3026 aa12.97□□□□□ -0.33
CLSTN3-205ENST00000535452 MGAT4DA6NG13 374 aa12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 AURKAO14965 403 aa12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 CREG1O75629 220 aa12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 TJP3O95049 919 aa12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 ZBTB11O95625 1053 aaPredicted RBP12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 MTHFD1P11586 935 aaKnown RBP12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 GSDMDP57764 484 aa12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 TAF1AQ15573 450 aaPredicted RBP12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 RPE65Q16518 533 aa12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 DARS2Q6PI48 645 aaKnown RBP12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 ZNF547Q8IVP9 402 aa12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 ZNF567Q8N184 647 aa12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 RASGEF1AQ8N9B8 481 aa12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 KLHL6Q8WZ60 621 aa12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 MR1Q95460 341 aa12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 TADA1Q96BN2 335 aa12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 TTC1Q99614 292 aa12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 COPS8Q99627 209 aa12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 EPN3Q9H201 632 aa12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 GBA3Q9H227 469 aa12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 SYTL2Q9HCH5 934 aa12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 ACSS2Q9NR19 701 aa12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 FGF21Q9NSA1 209 aa12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 SMOXQ9NWM0 555 aa12.96□□□□□ -0.33
CLSTN3-205ENST00000535452 ZFC3H1O60293 1989 aaKnown RBP12.96□□□□□ -0.34
CLSTN3-205ENST00000535452 hCG_1818297A0A087WSY0 165 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 GSAPA4D1B5 854 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 OR5K3A6NET4 321 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 UGT1A9O60656 530 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 VPS4BO75351 444 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 SCRG1O75711 98 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 SRP72O76094 671 aaKnown RBP12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 RECKO95980 971 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 PECAM1P16284 738 aaPredicted RBP12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 UGT1A6P19224 532 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 CDH3P22223 829 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 UGT1A1P22309 533 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 UGT1A4P22310 534 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 HADHBP55084 474 aaKnown RBP12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 TUBB4BP68371 445 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 ADCY2Q08462 1091 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 WASHC5Q12768 1159 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 TUBB2AQ13885 445 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 NFE2L1Q14494 772 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 C11orf63Q6NUN7 778 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 KDELC1Q6UW63 502 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 ARHGEF18Q6ZSZ5 1173 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 ASB18Q6ZVZ8 466 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 SYVN1Q86TM6 617 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 CFAP206Q8IYR0 622 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 OR4K2Q8NGD2 314 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 OR2L2Q8NH16 312 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 CPT1BQ92523 772 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 CLIP3Q96DZ5 547 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 MRGPRX2Q96LB1 330 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 TUBB2BQ9BVA1 445 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 HEMGNQ9BXL5 484 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 SPRY4Q9C004 299 aa12.95□□□□□ -0.34
CLSTN3-205ENST00000535452 WWP1Q9H0M0 922 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms