RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 ASB8Q9H765 288 aa13.78□□□□□ -0.2
SF3B2-215ENST00000534307 LRRC40Q9H9A6 602 aa13.78□□□□□ -0.2
SF3B2-215ENST00000534307 FBXO8Q9NRD0 319 aa13.78□□□□□ -0.2
SF3B2-215ENST00000534307 SLC39A1Q9NY26 324 aa13.78□□□□□ -0.2
SF3B2-215ENST00000534307 IGLV3-16A0A075B6K0 115 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 TRBV5-4A0A0C4DH59 114 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 NBASA2RRP1 2371 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 MGAT4DA6NG13 374 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 A8MU76 341 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 H7C0S8 307 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 USP9YO00507 2555 aaPredicted RBP13.77□□□□□ -0.21
SF3B2-215ENST00000534307 CCL22O00626 93 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 TOX3O15405 576 aaPredicted RBP13.77□□□□□ -0.21
SF3B2-215ENST00000534307 LIASO43766 372 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 KRT86O43790 486 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 AP2A1O95782 977 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 PTMAP06454 111 aaKnown RBP13.77□□□□□ -0.21
SF3B2-215ENST00000534307 TYRP1P17643 537 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 MSH3P20585 1137 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 AKT1P31749 480 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 HADHAP40939 763 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 CAPZBP47756 277 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 LEPRP48357 1165 aaKnown RBP13.77□□□□□ -0.21
SF3B2-215ENST00000534307 RPE65Q16518 533 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 P3H1Q32P28 736 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 FNBP1LQ5T0N5 605 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 DCAF12Q5T6F0 453 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 KIAA1614Q5VZ46 1190 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 ZNF662Q6ZS27 426 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 MICALCLQ6ZW33 695 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 FAM129CQ86XR2 697 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 NXPE1Q8N323 547 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 BEND7Q8N7W2 519 aaPredicted RBP13.77□□□□□ -0.21
SF3B2-215ENST00000534307 OR2L2Q8NH16 312 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 RSC1A1Q92681 617 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 NKD1Q969G9 470 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 CXorf40BQ96DE9 158 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 SGF29Q96ES7 293 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 DNAJC1Q96KC8 554 aaKnown RBP13.77□□□□□ -0.21
SF3B2-215ENST00000534307 TEFMQ96QE5 360 aaKnown RBP13.77□□□□□ -0.21
SF3B2-215ENST00000534307 RAB33BQ9H082 229 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 EPHA6Q9UF33 1036 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 KLHL3Q9UH77 587 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 GUCA1BQ9UMX6 200 aa13.77□□□□□ -0.21
SF3B2-215ENST00000534307 KLHL33A6NCF5 533 aa13.76□□□□□ -0.21
SF3B2-215ENST00000534307 GOLGA6L6A8MZA4 724 aa13.76□□□□□ -0.21
SF3B2-215ENST00000534307 CAPN5O15484 640 aaPredicted RBP13.76□□□□□ -0.21
SF3B2-215ENST00000534307 HALP42357 657 aa13.76□□□□□ -0.21
SF3B2-215ENST00000534307 CSRP3P50461 194 aa13.76□□□□□ -0.21
SF3B2-215ENST00000534307 TMPRSS15P98073 1019 aa13.76□□□□□ -0.21
SF3B2-215ENST00000534307 ZNF658BQ4V348 819 aaPredicted RBP13.76□□□□□ -0.21
SF3B2-215ENST00000534307 MANEAQ5SRI9 462 aa13.76□□□□□ -0.21
SF3B2-215ENST00000534307 MEI1Q5TIA1 1274 aa13.76□□□□□ -0.21
SF3B2-215ENST00000534307 DET1Q7L5Y6 550 aa13.76□□□□□ -0.21
SF3B2-215ENST00000534307 SNX20Q7Z614 316 aa13.76□□□□□ -0.21
SF3B2-215ENST00000534307 SLC13A5Q86YT5 568 aaPredicted RBP13.76□□□□□ -0.21
SF3B2-215ENST00000534307 ULK4Q96C45 1275 aa13.76□□□□□ -0.21
SF3B2-215ENST00000534307 MED8Q96G25 268 aa13.76□□□□□ -0.21
SF3B2-215ENST00000534307 FRMD8P1Q9BZ68 369 aaPredicted RBP13.76□□□□□ -0.21
SF3B2-215ENST00000534307 ZNF768Q9H5H4 540 aaKnown RBP13.76□□□□□ -0.21
SF3B2-215ENST00000534307 APMAPQ9HDC9 416 aa13.76□□□□□ -0.21
SF3B2-215ENST00000534307 NLE1Q9NVX2 485 aaPredicted RBP13.76□□□□□ -0.21
SF3B2-215ENST00000534307 SEMA5BQ9P283 1151 aa13.76□□□□□ -0.21
SF3B2-215ENST00000534307 PILRAQ9UKJ1 303 aa13.76□□□□□ -0.21
SF3B2-215ENST00000534307 PCDHB11Q9Y5F2 797 aa13.76□□□□□ -0.21
SF3B2-215ENST00000534307 PCDHGA4Q9Y5G9 962 aa13.76□□□□□ -0.21
SF3B2-215ENST00000534307 TEP1Q99973 2627 aaKnown RBP13.76□□□□□ -0.21
SF3B2-215ENST00000534307 MROH6A6NGR9 719 aa13.75□□□□□ -0.21
SF3B2-215ENST00000534307 MTHFD1P11586 935 aaKnown RBP13.75□□□□□ -0.21
SF3B2-215ENST00000534307 AMD1P17707 334 aa13.75□□□□□ -0.21
SF3B2-215ENST00000534307 TPH1P17752 444 aa13.75□□□□□ -0.21
SF3B2-215ENST00000534307 ITGALP20701 1170 aa13.75□□□□□ -0.21
SF3B2-215ENST00000534307 PBLDP30039 288 aaPredicted RBP13.75□□□□□ -0.21
SF3B2-215ENST00000534307 STIP1P31948 543 aaKnown RBP13.75□□□□□ -0.21
SF3B2-215ENST00000534307 MC4RP32245 332 aa13.75□□□□□ -0.21
SF3B2-215ENST00000534307 PPM1FP49593 454 aaPredicted RBP13.75□□□□□ -0.21
SF3B2-215ENST00000534307 PRLHRP49683 370 aa13.75□□□□□ -0.21
SF3B2-215ENST00000534307 CDKN1CP49918 316 aaPredicted RBP13.75□□□□□ -0.21
SF3B2-215ENST00000534307 POU6F1Q14863 301 aa13.75□□□□□ -0.21
SF3B2-215ENST00000534307 SIX1Q15475 284 aaPredicted RBP13.75□□□□□ -0.21
SF3B2-215ENST00000534307 GPR33Q49SQ1 333 aa13.75□□□□□ -0.21
SF3B2-215ENST00000534307 SEL1L2Q5TEA6 688 aa13.75□□□□□ -0.21
SF3B2-215ENST00000534307 PRSS42Q7Z5A4 293 aa13.75□□□□□ -0.21
SF3B2-215ENST00000534307 JPH3Q8WXH2 748 aaPredicted RBP13.75□□□□□ -0.21
SF3B2-215ENST00000534307 LRRC45Q96CN5 670 aa13.75□□□□□ -0.21
SF3B2-215ENST00000534307 TGM7Q96PF1 710 aa13.75□□□□□ -0.21
SF3B2-215ENST00000534307 COPS8Q99627 209 aa13.75□□□□□ -0.21
SF3B2-215ENST00000534307 CTRCQ99895 268 aa13.75□□□□□ -0.21
SF3B2-215ENST00000534307 ZPBPQ9BS86 351 aa13.75□□□□□ -0.21
SF3B2-215ENST00000534307 TRIM4Q9C037 500 aa13.75□□□□□ -0.21
SF3B2-215ENST00000534307 FAM96AQ9H5X1 160 aa13.75□□□□□ -0.21
SF3B2-215ENST00000534307 CRLS1Q9UJA2 301 aa13.75□□□□□ -0.21
SF3B2-215ENST00000534307 ACSL5Q9ULC5 683 aa13.75□□□□□ -0.21
SF3B2-215ENST00000534307 PSMD13Q9UNM6 376 aa13.75□□□□□ -0.21
SF3B2-215ENST00000534307 NOTCH2Q04721 2471 aa13.74□□□□□ -0.21
SF3B2-215ENST00000534307 ERI2A8K979 691 aaKnown RBP13.74□□□□□ -0.21
SF3B2-215ENST00000534307 PSMD3O43242 534 aa13.74□□□□□ -0.21
SF3B2-215ENST00000534307 KIF1CO43896 1103 aaKnown RBP13.74□□□□□ -0.21
SF3B2-215ENST00000534307 SUN1O94901 812 aa13.74□□□□□ -0.21
SF3B2-215ENST00000534307 PRSS56P0CW18 603 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms