RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 TRIM49P0CI25 452 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 TRIM49CP0CI26 452 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 MYCLP1P12525 358 aaPredicted RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 ADRB3P13945 408 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 GYPEP15421 78 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 ZNF37AP17032 561 aaPredicted RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 PDCP20941 246 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 NR4A1P22736 598 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 ABCD1P33897 745 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 CA5AP35218 305 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 LONP1P36776 959 aaKnown RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 DLSTP36957 453 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 RECQLP46063 649 aaPredicted RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 DAOAP59103 153 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 SRP54P61011 504 aaKnown RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 RPS18P62269 152 aaKnown RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 ADAM8P78325 824 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 NUCB2P80303 420 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 CEBPZQ03701 1054 aaKnown RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 PPP3CAQ08209 521 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 INCA1Q0VD86 236 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 HLTFQ14527 1009 aaKnown RBP eCLIP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 IRF4Q15306 451 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 ELOCQ15369 112 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 TAF5Q15542 800 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 ZRSR2Q15696 482 aaKnown RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 KLHL40Q2TBA0 621 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 WSCD2Q2TBF2 565 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 EDRF1Q3B7T1 1238 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 ZACNQ401N2 412 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 MAP9Q49MG5 647 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 RILPL1Q5EBL4 403 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 CERCAMQ5T4B2 595 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 DCAF12Q5T6F0 453 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 ARL6IP4Q66PJ3 421 aaKnown RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 FAM173BQ6P4H8 233 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 FAM199XQ6PEV8 388 aaPredicted RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 UBE2R2Q712K3 238 aaPredicted RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 PARS2Q7L3T8 475 aaKnown RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 OVCH1Q7RTY7 1134 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 TAC4Q86UU9 113 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 CHSY1Q86X52 802 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 NRROSQ86YC3 692 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 CCDC117Q8IWD4 279 aaPredicted RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 UNC45BQ8IWX7 931 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 FAM186BQ8IYM0 893 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 SLC34A3Q8N130 599 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 PELI3Q8N2H9 469 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 FSTL5Q8N475 847 aaPredicted RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 SH2D3CQ8N5H7 860 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 PDILTQ8N807 584 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 BMPERQ8N8U9 685 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 ANKRD52Q8NB46 1076 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 GLIS1Q8NBF1 620 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 DQX1Q8TE96 717 aaKnown RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 OR1E3Q8WZA6 343 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 TFAP2BQ92481 460 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 CAVIN3Q969G5 261 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 AZIN2Q96A70 460 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 KIAA1143Q96AT1 154 aaPredicted RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 TMEM159Q96B96 161 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 FOXRED1Q96CU9 486 aaPredicted RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 SLC39A13Q96H72 371 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 AK8Q96MA6 479 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 LENG8Q96PV6 779 aaPredicted RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 PRMT1Q99873 361 aaKnown RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 CPPED1Q9BRF8 314 aaPredicted RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 WRAP53Q9BUR4 548 aaKnown RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 SLC25A23Q9BV35 468 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 TWSG1Q9GZX9 223 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 MIS12Q9H081 205 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 BLZF1Q9H2G9 400 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 TOR3AQ9H497 397 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 DPEP2Q9H4A9 486 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 LRRC4Q9HBW1 653 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 KIAA1586Q9HCI6 787 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 PNPLA8Q9NP80 782 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 PCDH12Q9NPG4 1184 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 SLAMF7Q9NQ25 335 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 ANLNQ9NQW6 1124 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 DYRK4Q9NR20 520 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 OLFML3Q9NRN5 406 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 ABCC13Q9NSE7 274 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 OLA1Q9NTK5 396 aaKnown RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 KCMF1Q9P0J7 381 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 AKAP7Q9P0M2 348 aaPredicted RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 COX16Q9P0S2 106 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 IL36AQ9UHA7 158 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 VPS28Q9UK41 221 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 LIMCH1Q9UPQ0 1083 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 MAPRE3Q9UPY8 281 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 NTNG1Q9Y2I2 539 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 RPS6KL1Q9Y6S9 549 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 UNC13CQ8NB66 2214 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 TCHHQ07283 1943 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 PRRC2AP48634 2157 aaKnown RBP2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 FAM170AA1A519 330 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 A6NCN8 305 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 RHPN2P1A8MT19 583 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 KCNU1A8MYU2 1149 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms