RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 AASDHPPTQ9NRN7 309 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 WARS2Q9UGM6 360 aaKnown RBP19.09■□□□□ 0.65
CAPN1-226ENST00000533820 PTBP2Q9UKA9 531 aaKnown RBP19.09■□□□□ 0.65
CAPN1-226ENST00000533820 MYO16Q9Y6X6 1858 aa19.08■□□□□ 0.65
CAPN1-226ENST00000533820 SNAP91O60641 907 aa19.08■□□□□ 0.65
CAPN1-226ENST00000533820 CAPN1P07384 714 aa19.08■□□□□ 0.65
CAPN1-226ENST00000533820 HMOX2P30519 316 aa19.08■□□□□ 0.65
CAPN1-226ENST00000533820 ATP6AP1LQ52LC2 224 aa19.08■□□□□ 0.65
CAPN1-226ENST00000533820 LETMD1Q6P1Q0 360 aa19.08■□□□□ 0.65
CAPN1-226ENST00000533820 FAM126BQ8IXS8 530 aa19.08■□□□□ 0.65
CAPN1-226ENST00000533820 DGCR6LQ9BY27 220 aa19.08■□□□□ 0.65
CAPN1-226ENST00000533820 SCML2Q9UQR0 700 aa19.08■□□□□ 0.65
CAPN1-226ENST00000533820 A0A0U1RQF3 1178 aa19.08■□□□□ 0.64
CAPN1-226ENST00000533820 FFAR3O14843 346 aa19.08■□□□□ 0.64
CAPN1-226ENST00000533820 GPR42O15529 346 aa19.08■□□□□ 0.64
CAPN1-226ENST00000533820 NOL3O60936 208 aaKnown RBP19.08■□□□□ 0.64
CAPN1-226ENST00000533820 RPS17P08708 135 aaKnown RBP19.08■□□□□ 0.64
CAPN1-226ENST00000533820 ERVPABLB-1P60509 514 aa19.08■□□□□ 0.64
CAPN1-226ENST00000533820 RPS24P62847 133 aaKnown RBP19.08■□□□□ 0.64
CAPN1-226ENST00000533820 Q6ZSR9 355 aa19.08■□□□□ 0.64
CAPN1-226ENST00000533820 ITFG1Q8TB96 612 aa19.08■□□□□ 0.64
CAPN1-226ENST00000533820 TBC1D15Q8TC07 691 aa19.08■□□□□ 0.64
CAPN1-226ENST00000533820 GIPC2Q8TF65 315 aa19.08■□□□□ 0.64
CAPN1-226ENST00000533820 C17orf80Q9BSJ5 609 aa19.08■□□□□ 0.64
CAPN1-226ENST00000533820 BDH2Q9BUT1 245 aa19.08■□□□□ 0.64
CAPN1-226ENST00000533820 DERL2Q9GZP9 239 aa19.08■□□□□ 0.64
CAPN1-226ENST00000533820 INTS10Q9NVR2 710 aaKnown RBP19.08■□□□□ 0.64
CAPN1-226ENST00000533820 TRMT6Q9UJA5 497 aaKnown RBP19.08■□□□□ 0.64
CAPN1-226ENST00000533820 POLR3HQ9Y535 204 aaPredicted RBP19.08■□□□□ 0.64
CAPN1-226ENST00000533820 DGKBQ9Y6T7 804 aa19.08■□□□□ 0.64
CAPN1-226ENST00000533820 C1orf232A0A0U1RR37 186 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 LCHNA4D1U4 455 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 ANKRD34BA5PLL1 514 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 E5RI56 91 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 EEDO75530 441 aaKnown RBP19.07■□□□□ 0.64
CAPN1-226ENST00000533820 C21orf59P57076 290 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 NADSYN1Q6IA69 706 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 GALNT7Q86SF2 657 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 BPHLQ86WA6 291 aaPredicted RBP19.07■□□□□ 0.64
CAPN1-226ENST00000533820 PARP8Q8N3A8 854 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 TANKQ92844 425 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 NTN4Q9HB63 628 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 PCDHGA3Q9Y5H0 932 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 NDST3O95803 873 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 UROSP10746 265 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 PRKACGP22612 351 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 PRKG2Q13237 762 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 E2F2Q14209 437 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 AASDHQ4L235 1098 aaPredicted RBP19.07■□□□□ 0.64
CAPN1-226ENST00000533820 SPATA19Q7Z5L4 167 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 MRPL10Q7Z7H8 261 aaKnown RBP19.07■□□□□ 0.64
CAPN1-226ENST00000533820 SFRP1Q8N474 314 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 CD320Q9NPF0 282 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 HACD3Q9P035 362 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 ZNHIT2Q9UHR6 403 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 U3KQV3 271 aa19.07■□□□□ 0.64
CAPN1-226ENST00000533820 PRAMEF11O60813 436 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 MC4RP32245 332 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 GSSP48637 474 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 SUOXP51687 545 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 ERVK-8P63133 956 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 ACVR1Q04771 509 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 PTGR1Q14914 329 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 CCNYL2Q5T2Q4 361 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 ENPP6Q6UWR7 440 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 BHMTQ93088 406 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 THUMPD3Q9BV44 507 aaKnown RBP19.06■□□□□ 0.64
CAPN1-226ENST00000533820 CARS2Q9HA77 564 aaKnown RBP19.06■□□□□ 0.64
CAPN1-226ENST00000533820 POU2F3Q9UKI9 436 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 PCDHGA11Q9Y5H2 935 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 PTGES3LE9PB15 166 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 H0Y858 1186 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 DFNA5O60443 496 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 HOXC8P31273 242 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 MTHFRP42898 656 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 BMXP51813 675 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 ARSFP54793 590 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 SPRYD7Q5W111 196 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 LINGO4Q6UY18 593 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 C11orf74Q86VG3 221 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 ABI1Q8IZP0 508 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 TRPV1Q8NER1 839 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 OR56A4Q8NGH8 313 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 OSCP1Q8WVF1 389 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 PLEKHA8Q96JA3 519 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 LRRC3Q9BY71 257 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 TLR9Q9NR96 1032 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 DICER1Q9UPY3 1922 aaKnown RBP19.06■□□□□ 0.64
CAPN1-226ENST00000533820 SYCE1LA8MT33 242 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 CBX4O00257 560 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 RFTN2Q52LD8 501 aaPredicted RBP19.06■□□□□ 0.64
CAPN1-226ENST00000533820 Q8N9G6 341 aaPredicted RBP19.06■□□□□ 0.64
CAPN1-226ENST00000533820 GPR150Q8NGU9 434 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 CLHC1Q8NHS4 586 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 ZFP14Q9HCL3 533 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 SLC45A1Q9Y2W3 748 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 CORINQ9Y5Q5 1042 aa19.06■□□□□ 0.64
CAPN1-226ENST00000533820 VPS26AO75436 327 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 OGNP20774 298 aaKnown RBP19.05■□□□□ 0.64
CAPN1-226ENST00000533820 ADARB1P78563 741 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms