RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.67□□□□□ -1.02
PACS1-213ENST00000533756 OSGEPL1Q9H4B0 414 aa8.67□□□□□ -1.02
PACS1-213ENST00000533756 PDFQ9HBH1 243 aa8.67□□□□□ -1.02
PACS1-213ENST00000533756 SOHLH2Q9NX45 425 aa8.67□□□□□ -1.02
PACS1-213ENST00000533756 IFT80Q9P2H3 777 aaPredicted RBP8.67□□□□□ -1.02
PACS1-213ENST00000533756 CD84Q9UIB8 345 aa8.67□□□□□ -1.02
PACS1-213ENST00000533756 NEU3Q9UQ49 428 aa8.67□□□□□ -1.02
PACS1-213ENST00000533756 LUC7L2Q9Y383 392 aaKnown RBP8.67□□□□□ -1.02
PACS1-213ENST00000533756 MRPS2Q9Y399 296 aaKnown RBP8.67□□□□□ -1.02
PACS1-213ENST00000533756 OR5K3A6NET4 321 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 TMEM150CB9EJG8 249 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 H7C1Q1 480 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 PRRG2O14669 202 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 CETN3O15182 167 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 POLR2DO15514 142 aaKnown RBP8.66□□□□□ -1.02
PACS1-213ENST00000533756 CNOT3O75175 753 aaKnown RBP8.66□□□□□ -1.02
PACS1-213ENST00000533756 ALOX12BO75342 701 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 TSPAN12O95859 305 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 ERBB2P04626 1255 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 CBSLP0DN79 551 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 ABOP16442 354 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 CBSP35520 551 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 SYCP1Q15431 976 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 FOXD4L6Q3SYB3 417 aaPredicted RBP8.66□□□□□ -1.02
PACS1-213ENST00000533756 SHC4Q6S5L8 630 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 FOXD4L3Q6VB84 417 aaPredicted RBP8.66□□□□□ -1.02
PACS1-213ENST00000533756 RRAGAQ7L523 313 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 RAVER1Q8IY67 606 aaKnown RBP8.66□□□□□ -1.02
PACS1-213ENST00000533756 TTC30BQ8N4P2 665 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 RTL3Q8N8U3 475 aaKnown RBP8.66□□□□□ -1.02
PACS1-213ENST00000533756 ARMC2Q8NEN0 867 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 SUN3Q8TAQ9 357 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 MCCC1Q96RQ3 725 aaPredicted RBP8.66□□□□□ -1.02
PACS1-213ENST00000533756 TLR10Q9BXR5 811 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 CATSPERBQ9H7T0 1116 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 BEX4Q9NWD9 120 aaPredicted RBP8.66□□□□□ -1.02
PACS1-213ENST00000533756 HRASLS2Q9NWW9 162 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 PLA2G3Q9NZ20 509 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 CNOT6Q9ULM6 557 aaKnown RBP8.66□□□□□ -1.02
PACS1-213ENST00000533756 L3MBTL1Q9Y468 752 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 CNTRLQ7Z7A1 2325 aa8.66□□□□□ -1.02
PACS1-213ENST00000533756 DOCK10Q96BY6 2186 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 RCCD1A6NED2 376 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 NPIPB15A6NHN6 443 aaPredicted RBP8.65□□□□□ -1.02
PACS1-213ENST00000533756 OR52A4PA6NMU1 304 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 FAM90A27PA6NNH2 459 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 GPR89AB7ZAQ6 455 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 FAM72CH0Y354 149 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 PMM2O15305 246 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 PRAMEF11O60813 436 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 SOCS5O75159 536 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 MTA2O94776 668 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 PRAMEF1O95521 474 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 CPP00450 1065 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 TPOP07202 933 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 GPR89BP0CG08 455 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 TNFAIP3P21580 790 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 GNA15P30679 374 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 SOX11P35716 441 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 SCNN1BP51168 640 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 CTSCP53634 463 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 TUBB8Q3ZCM7 444 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 ZCWPW2Q504Y3 356 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 FAM72AQ5TYM5 149 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 TMEM211Q6ICI0 200 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 FAM72DQ6L9T8 149 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 RHBDD2Q6NTF9 364 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 KIRREL2Q6UWL6 708 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 RFLNAQ6ZTI6 216 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 FAM72BQ86X60 149 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 UMODL1-AS1Q8N2C9 162 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 PROKR1Q8TCW9 393 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 ZFPM2Q8WW38 1151 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 RIOK2Q9BVS4 552 aaKnown RBP8.65□□□□□ -1.02
PACS1-213ENST00000533756 SYNCQ9H7C4 482 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 CDC23Q9UJX2 597 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 MKL2Q9ULH7 1088 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 RNF6Q9Y252 685 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 PPIL1Q9Y3C6 166 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 AP1M2Q9Y6Q5 423 aa8.65□□□□□ -1.02
PACS1-213ENST00000533756 AKAP6Q13023 2319 aa8.65□□□□□ -1.03
PACS1-213ENST00000533756 NUP210LQ5VU65 1888 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 J3KR12 359 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 SMAD7O15105 426 aaKnown RBP8.64□□□□□ -1.03
PACS1-213ENST00000533756 SPRY1O43609 319 aaPredicted RBP8.64□□□□□ -1.03
PACS1-213ENST00000533756 PALMO75781 387 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 USP1O94782 785 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 KRT5P13647 590 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 FDXRP22570 491 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 PREPP48147 710 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 EPHB1P54762 984 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 PTSQ03393 145 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 ATG9BQ674R7 924 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 CAPN12Q6ZSI9 719 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 CEP128Q6ZU80 1094 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 USP45Q70EL2 814 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 TSPAN33Q86UF1 283 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 OOSP2Q86WS3 158 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 ZZZ3Q8IYH5 903 aa8.64□□□□□ -1.03
PACS1-213ENST00000533756 LMO3Q8TAP4 145 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms