RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 CENPXA8MT69 81 aa11.14□□□□□ -0.63
AMBRA1-211ENST00000533727 IDH3BO43837 385 aa11.14□□□□□ -0.63
AMBRA1-211ENST00000533727 MT-CO1P00395 513 aa11.14□□□□□ -0.63
AMBRA1-211ENST00000533727 EPOP01588 193 aa11.14□□□□□ -0.63
AMBRA1-211ENST00000533727 IDO1P14902 403 aa11.14□□□□□ -0.63
AMBRA1-211ENST00000533727 VAV1P15498 845 aa11.14□□□□□ -0.63
AMBRA1-211ENST00000533727 ZNF24P17028 368 aa11.14□□□□□ -0.63
AMBRA1-211ENST00000533727 C1DQ13901 141 aaKnown RBP11.14□□□□□ -0.63
AMBRA1-211ENST00000533727 TAB1Q15750 504 aa11.14□□□□□ -0.63
AMBRA1-211ENST00000533727 MAPKAPK3Q16644 382 aa11.14□□□□□ -0.63
AMBRA1-211ENST00000533727 INO80DQ53TQ3 878 aaPredicted RBP11.14□□□□□ -0.63
AMBRA1-211ENST00000533727 C12orf76Q8N812 135 aaPredicted RBP11.14□□□□□ -0.63
AMBRA1-211ENST00000533727 ATG16L2Q8NAA4 619 aa11.14□□□□□ -0.63
AMBRA1-211ENST00000533727 POMGNT2Q8NAT1 580 aa11.14□□□□□ -0.63
AMBRA1-211ENST00000533727 KIAA1143Q96AT1 154 aaPredicted RBP11.14□□□□□ -0.63
AMBRA1-211ENST00000533727 CLIP3Q96DZ5 547 aa11.14□□□□□ -0.63
AMBRA1-211ENST00000533727 MBD2Q9UBB5 411 aa11.14□□□□□ -0.63
AMBRA1-211ENST00000533727 TRPS1Q9UHF7 1281 aa11.14□□□□□ -0.63
AMBRA1-211ENST00000533727 INVSQ9Y283 1065 aa11.14□□□□□ -0.63
AMBRA1-211ENST00000533727 SLC9A8Q9Y2E8 581 aa11.14□□□□□ -0.63
AMBRA1-211ENST00000533727 RCCD1A6NED2 376 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 HDAC3O15379 428 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 CLDN9O95484 217 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 CBSLP0DN79 551 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 ETS2P15036 469 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 ITGA2P17301 1181 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 FGFR3P22607 806 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 NOS3P29474 1203 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 CBSP35520 551 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 CASRP41180 1078 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 HNF4AP41235 474 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 ABCG1P45844 678 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 MAPK10P53779 464 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 PSMD4P55036 377 aaKnown RBP11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 ACAP2Q15057 778 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 SLC5A9Q2M3M2 681 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 VPS26BQ4G0F5 336 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 ZNF549Q6P9A3 640 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 TAS1R3Q7RTX0 852 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 SETD9Q8NE22 299 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 SPATA22Q8NHS9 363 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 SETD7Q8WTS6 366 aaKnown RBP11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 CRYGNQ8WXF5 182 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 MTFMTQ96DP5 389 aaKnown RBP11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 TMEM209Q96SK2 561 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 ZNF607Q96SK3 696 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 RERGLQ9H628 205 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 COG5Q9UP83 839 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 WFS1O76024 890 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 AP2A2O94973 939 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 EN2P19622 333 aaPredicted RBP11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 LIMK2P53671 638 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 PRKAG1P54619 331 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 UAP1L1Q3KQV9 507 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 APTXQ7Z2E3 356 aaKnown RBP11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 SPATA19Q7Z5L4 167 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 FGD2Q7Z6J4 655 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 DHDDSQ86SQ9 333 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 CAMK1DQ8IU85 385 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 RNF148Q8N7C7 305 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 SUN3Q8TAQ9 357 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 ITCHQ96J02 903 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 TRIM39Q9HCM9 518 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 PTPRHQ9HD43 1115 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 HCN3Q9P1Z3 774 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 PCDHGA11Q9Y5H2 935 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 CPED1A4D0V7 1026 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 TMEM150CB9EJG8 249 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 FFAR3O14843 346 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 GPR42O15529 346 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 NR2F1P10589 423 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 CSTF2P33240 577 aaKnown RBP eCLIP11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 AP1S2P56377 157 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 RPL38P63173 70 aaKnown RBP11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 FOXM1Q08050 763 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 GALNT2Q10471 571 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 KLHL17Q6TDP4 642 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 ISLR2Q6UXK2 745 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 FAM46DQ8NEK8 389 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 PLEKHG4BQ96PX9 1271 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 SGIP1Q9BQI5 828 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 COPS7AQ9UBW8 275 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 RSL24D1Q9UHA3 163 aaKnown RBP11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 NRAPQ86VF7 1730 aa11.13□□□□□ -0.63
AMBRA1-211ENST00000533727 TCRBV21S2A2A0A5A6 115 aa11.12□□□□□ -0.63
AMBRA1-211ENST00000533727 NPEPPSL1A6NEC2 478 aa11.12□□□□□ -0.63
AMBRA1-211ENST00000533727 SOBPA7XYQ1 873 aa11.12□□□□□ -0.63
AMBRA1-211ENST00000533727 LSM1O15116 133 aaKnown RBP11.12□□□□□ -0.63
AMBRA1-211ENST00000533727 UMPSP11172 480 aa11.12□□□□□ -0.63
AMBRA1-211ENST00000533727 GNAZP19086 355 aa11.12□□□□□ -0.63
AMBRA1-211ENST00000533727 ALAS2P22557 587 aa11.12□□□□□ -0.63
AMBRA1-211ENST00000533727 BNC1Q01954 994 aa11.12□□□□□ -0.63
AMBRA1-211ENST00000533727 GSTM4Q03013 218 aa11.12□□□□□ -0.63
AMBRA1-211ENST00000533727 DHCR24Q15392 516 aa11.12□□□□□ -0.63
AMBRA1-211ENST00000533727 CLLU1OSQ5K130 101 aa11.12□□□□□ -0.63
AMBRA1-211ENST00000533727 PERM1Q5SV97 790 aa11.12□□□□□ -0.63
AMBRA1-211ENST00000533727 CCNYL2Q5T2Q4 361 aa11.12□□□□□ -0.63
AMBRA1-211ENST00000533727 RIPOR1Q6ZS17 1223 aa11.12□□□□□ -0.63
AMBRA1-211ENST00000533727 ADGRG2Q8IZP9 1017 aa11.12□□□□□ -0.63
AMBRA1-211ENST00000533727 LRRC57Q8N9N7 239 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms