RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 NCDNQ9UBB6 729 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 CDH7Q9ULB5 785 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 SH3GLB1Q9Y371 365 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 PCDHGA11Q9Y5H2 935 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 TMEM150CB9EJG8 249 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 CPN2P22792 545 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 S100GP29377 79 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 CCKBRP32239 447 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 TTKP33981 857 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 CASRP41180 1078 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 OMPP47874 163 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 ATXN1P54253 815 aaKnown RBP6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 JAM2P57087 298 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 AMIGO2Q86SJ2 522 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 ATCAYQ86WG3 371 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 AMER2Q8N7J2 671 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 SIDT2Q8NBJ9 832 aaKnown RBP6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 CYP2S1Q96SQ9 504 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 NPAS2Q99743 824 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 TBC1D10AQ9BXI6 508 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 LRMDAQ9H2I8 198 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 RHBDL2Q9NX52 303 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 EHD3Q9NZN3 535 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 CRNNQ9UBG3 495 aaPredicted RBP6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 HMGXB4Q9UGU5 601 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 IKZF2Q9UKS7 526 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 SATB2Q9UPW6 733 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 REXO2Q9Y3B8 237 aaKnown RBP6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 KERAO60938 352 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 OR5F1O95221 314 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 UROSP10746 265 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 NDUFS1P28331 727 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 PBX1P40424 430 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 C1QTNF8P60827 252 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 CYP4F3Q08477 520 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 HSPB3Q12988 150 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 PPM1JQ5JR12 505 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 ISLR2Q6UXK2 745 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 PIK3C3Q8NEB9 887 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 OR7A2PQ8NGA2 310 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 PCDH19Q8TAB3 1148 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 HCAR2Q8TDS4 363 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 UBASH3BQ8TF42 649 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 NTAN1Q96AB6 310 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 DMAC2Q9NW81 257 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 ILVBLA1L0T0 632 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 EDF1O60869 148 aaKnown RBP6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 TMCC2O75069 709 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 CHRNGP07510 517 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 PPIDQ08752 370 aaKnown RBP6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 NFATC2Q13469 925 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 CCINQ13939 588 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 MLIPQ5VWP3 458 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 ZNF776Q68DI1 518 aaPredicted RBP6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 TTC27Q6P3X3 843 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 ZYG11AQ6WRX3 759 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 GK5Q6ZS86 529 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 IKBIPQ70UQ0 350 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 CMTM8Q8IZV2 173 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 CRYBG2Q8N1P7 616 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 MPP5Q8N3R9 675 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 PIH1D2Q8WWB5 315 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 KCTD13Q8WZ19 329 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 ZNF599Q96NL3 588 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 RAD9AQ99638 391 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 EPB41L1Q9H4G0 881 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 EBF3Q9H4W6 596 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 DIABLOQ9NR28 239 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 CALML5Q9NZT1 146 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 LTBP3Q9NS15 1303 aa6.31□□□□□ -1.4
UBQLN1-206ENST00000533705 DNM1LO00429 736 aa6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 DCLK1O15075 740 aa6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 FAM163BP0C2L3 166 aa6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 CSF2RAP15509 400 aa6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 HSD17B2P37059 387 aa6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 MLLT3P42568 568 aaPredicted RBP6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 SRP54P61011 504 aaKnown RBP6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 ATP1A4Q13733 1029 aa6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 PUS10Q3MIT2 529 aaKnown RBP6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 GPR33Q49SQ1 333 aa6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 ARMC3Q5W041 872 aa6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 NAIF1Q69YI7 327 aaPredicted RBP6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 GALNT7Q86SF2 657 aa6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 RNPEPL1Q9HAU8 725 aa6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 INTS10Q9NVR2 710 aaKnown RBP6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 NOCTQ9UK39 431 aaKnown RBP6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 CDC14AQ9UNH5 594 aa6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 C3P01024 1663 aa6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 TCRBV7S2A1N4TA0A589 114 aa6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 IRGMA1A4Y4 181 aa6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 RNF225M0QZC1 329 aaPredicted RBP6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 KPNA4O00629 521 aaPredicted RBP6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 KLHL18O94889 574 aa6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 PCSK2P16519 638 aa6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 COL9A3Q14050 684 aaPredicted RBP6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 SGCBQ16585 318 aa6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 WDR45BQ5MNZ6 344 aa6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 Q6ZVU0 165 aa6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 TBC1D21Q8IYX1 336 aa6.3□□□□□ -1.4
UBQLN1-206ENST00000533705 C11orf65Q8NCR3 313 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms