RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 RRP8O43159 456 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 VAPBO95292 243 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 SLU7O95391 586 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 POLBP06746 335 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 F3P13726 295 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 PGAM1P18669 254 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 MSH3P20585 1137 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 RBMS1P29558 406 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 ELK3P41970 407 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 DRG2P55039 364 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 GPLD1P80108 840 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 BIRC2Q13490 618 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 THOC5Q13769 683 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 GPR33Q49SQ1 333 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 ANKRD20A4Q4UJ75 823 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 MSS51Q4VC12 460 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 FASTKD1Q53R41 847 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 C3orf38Q5JPI3 329 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 LDLRAP1Q5SW96 308 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 ARMC3Q5W041 872 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 WASH2PQ6VEQ5 465 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 MICALCLQ6ZW33 695 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 CLEC14AQ86T13 490 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 PIM3Q86V86 326 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 LRRTM4Q86VH4 590 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 SLITRK4Q8IW52 837 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 IFT20Q8IY31 132 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 ZBED8Q8IZ13 594 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 Q8N9G6 341 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 ZNF248Q8NDW4 579 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 DDHD1Q8NEL9 900 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 OR4L1Q8NH43 312 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 FBXO25Q8TCJ0 367 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 SLC37A2Q8TED4 501 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 PATE1Q8WXA2 126 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 PEX13Q92968 403 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 SH3KBP1Q96B97 665 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 SIGLEC10Q96LC7 697 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 EBNA1BP2Q99848 306 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 TRIM56Q9BRZ2 755 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 WASH6PQ9NQA3 447 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 TBC1D29Q9UFV1 150 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 MTRF1LQ9UGC7 380 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 ZC3H7BQ9UGR2 993 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 PRKAB1Q9Y478 270 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 PCDHGA7Q9Y5G6 932 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 DNMT3AQ9Y6K1 912 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 CHD6Q8TD26 2715 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 IGHV1OR21-1A0A087WYE8 117 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 AGAP14A8MT82 685 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 CFAP99D6REC4 459 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 H7C0S8 307 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 PLD2O14939 933 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 EML2O95834 649 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 ITGA2BP08514 1039 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 PRSS56P0CW18 603 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 RALBP11234 206 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 ACP5P13686 325 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 ZNF7P17097 686 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 CD1CP29017 333 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 ALDH4A1P30038 563 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 PPARGP37231 505 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 CDKN1CP49918 316 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 PCBP4P57723 403 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 OR1D5P58170 312 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 TRA2AQ13595 282 aaKnown RBP eCLIP12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 LONRF1Q17RB8 773 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 KHDC1Q4VXA5 237 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 AARS2Q5JTZ9 985 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 GPRC6AQ5T6X5 926 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 LRRC69Q6ZNQ3 347 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 DET1Q7L5Y6 550 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 RAB11FIP2Q7L804 512 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 C11orf96Q7Z7L8 435 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 B3GNT8Q7Z7M8 397 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 SLC9B2Q86UD5 537 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 SERPINA9Q86WD7 417 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 ZNF547Q8IVP9 402 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 FBXO36Q8NEA4 188 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 PYROXD1Q8WU10 500 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 LRRC39Q96DD0 335 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 COPS8Q99627 209 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 NAT9Q9BTE0 207 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 B3GNT4Q9C0J1 378 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 STN1Q9H668 368 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 SYNDIG1Q9H7V2 258 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 UCK1Q9HA47 277 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 PPANQ9NQ55 473 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 KLC4Q9NSK0 619 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 TREX1Q9NSU2 369 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 CATSPERZQ9NTU4 200 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 C20orf96Q9NUD7 363 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 PDP2Q9P2J9 529 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 ACSL6Q9UKU0 697 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 KCNK6Q9Y257 313 aa12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 DSPP15924 2871 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-212ENST00000533058 KLHL33A6NCF5 533 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms