RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 TCAF1Q9Y4C2 921 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 PRAMEF33A0A0G2JMD5 474 aa15.06■□□□□ 0
CPSF1-210ENST00000532935 CES2O00748 559 aa15.06■□□□□ 0
CPSF1-210ENST00000532935 HGSO14964 777 aaPredicted RBP15.06■□□□□ 0
CPSF1-210ENST00000532935 KRT14P02533 472 aa15.06■□□□□ 0
CPSF1-210ENST00000532935 ITIH1P19827 911 aa15.06■□□□□ 0
CPSF1-210ENST00000532935 TPSB2P20231 275 aa15.06■□□□□ 0
CPSF1-210ENST00000532935 FOXN2P32314 431 aa15.06■□□□□ 0
CPSF1-210ENST00000532935 COILP38432 576 aaPredicted RBP15.06■□□□□ 0
CPSF1-210ENST00000532935 VPS41P49754 854 aa15.06■□□□□ 0
CPSF1-210ENST00000532935 SESN2P58004 480 aaPredicted RBP15.06■□□□□ 0
CPSF1-210ENST00000532935 ACVR1Q04771 509 aa15.06■□□□□ 0
CPSF1-210ENST00000532935 TRIP13Q15645 432 aaPredicted RBP15.06■□□□□ 0
CPSF1-210ENST00000532935 TPSAB1Q15661 275 aa15.06■□□□□ 0
CPSF1-210ENST00000532935 RPE65Q16518 533 aa15.06■□□□□ 0
CPSF1-210ENST00000532935 C19orf48Q6RUI8 117 aa15.06■□□□□ 0
CPSF1-210ENST00000532935 XKR5Q6UX68 686 aa15.06■□□□□ 0
CPSF1-210ENST00000532935 RBM12BQ8IXT5 1001 aaKnown RBP15.06■□□□□ 0
CPSF1-210ENST00000532935 HM13Q8TCT9 377 aa15.06■□□□□ 0
CPSF1-210ENST00000532935 NCSTNQ92542 709 aa15.06■□□□□ 0
CPSF1-210ENST00000532935 HDAC10Q969S8 669 aa15.06■□□□□ 0
CPSF1-210ENST00000532935 ZNF778Q96MU6 729 aa15.06■□□□□ 0
CPSF1-210ENST00000532935 SLC40A1Q9NP59 571 aa15.06■□□□□ 0
CPSF1-210ENST00000532935 PDP2Q9P2J9 529 aa15.06■□□□□ 0
CPSF1-210ENST00000532935 FAM8A1Q9UBU6 413 aa15.06■□□□□ 0
CPSF1-210ENST00000532935 ACSL5Q9ULC5 683 aa15.06■□□□□ 0
CPSF1-210ENST00000532935 PYCARDQ9ULZ3 195 aa15.06■□□□□ 0
CPSF1-210ENST00000532935 PTPRQQ9UMZ3 2332 aa15.05■□□□□ 0
CPSF1-210ENST00000532935 FAM208BQ5VWN6 2430 aa15.05■□□□□ 0
CPSF1-210ENST00000532935 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.05■□□□□ -0
CPSF1-210ENST00000532935 AP3B1O00203 1094 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 ZNF185O15231 689 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 GOT2P00505 430 aaKnown RBP15.05■□□□□ -0
CPSF1-210ENST00000532935 ITPKBP27987 946 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 ETV5P41161 510 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 NPY2RP49146 381 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 TERF1P54274 439 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 CDK16Q00536 496 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 GPS1Q13098 491 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 GPR18Q14330 331 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 ITIH4Q14624 930 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 PCID2Q5JVF3 399 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 SNAP47Q5SQN1 464 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 CCDC137Q6PK04 289 aaKnown RBP15.05■□□□□ -0
CPSF1-210ENST00000532935 AFTPHQ6ULP2 937 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 JAMLQ86YT9 394 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 CFAP206Q8IYR0 622 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 CLDN19Q8N6F1 224 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 GPR150Q8NGU9 434 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 PEX13Q92968 403 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.05■□□□□ -0
CPSF1-210ENST00000532935 NAF1Q96HR8 494 aaKnown RBP15.05■□□□□ -0
CPSF1-210ENST00000532935 IL22Q9GZX6 179 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 WWP1Q9H0M0 922 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 BFARQ9NZS9 450 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 OGFRQ9NZT2 677 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 PCDHGA7Q9Y5G6 932 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 ZFYVE26Q68DK2 2539 aa15.05■□□□□ -0
CPSF1-210ENST00000532935 AHCTF1Q8WYP5 2266 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 GOLGA6L10A0A0M3HER8 536 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 C17orf113A0A1B0GUU1 675 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 TCRBV7S3A2A0A539 114 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 PHF2O75151 1096 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 UBXN7O94888 489 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 SLC35G4P0C7Q5 338 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 MTHFD1P11586 935 aaKnown RBP15.04■□□□□ -0
CPSF1-210ENST00000532935 TYRP1P17643 537 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 SLC5A2P31639 672 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 CSTF2P33240 577 aaKnown RBP eCLIP15.04■□□□□ -0
CPSF1-210ENST00000532935 NSG1P42857 185 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 ABCG1P45844 678 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 MAPK10P53779 464 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 PRAMEP78395 509 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 CRADDP78560 199 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 KCNJ11Q14654 390 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 COL28A1Q2UY09 1125 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 LRRC8BQ6P9F7 803 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 PACS1Q6VY07 963 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 ZNF534Q76KX8 674 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 PLXDC1Q8IUK5 500 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 LILRA3Q8N6C8 439 aaPredicted RBP15.04■□□□□ -0
CPSF1-210ENST00000532935 AGBL5Q8NDL9 886 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 OR6P1Q8NGX9 317 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 OR4L1Q8NH43 312 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 KCNE4Q8WWG9 221 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 INSM2Q96T92 566 aaPredicted RBP15.04■□□□□ -0
CPSF1-210ENST00000532935 CCM2Q9BSQ5 444 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 VPS37BQ9H9H4 285 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 CHRAC1Q9NRG0 131 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 IMP3Q9NV31 184 aaKnown RBP15.04■□□□□ -0
CPSF1-210ENST00000532935 NEU2Q9Y3R4 380 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 CFAP20Q9Y6A4 193 aaKnown RBP15.04■□□□□ -0
CPSF1-210ENST00000532935 SDK2Q58EX2 2172 aa15.04■□□□□ -0
CPSF1-210ENST00000532935 MN1Q10571 1320 aaPredicted RBP15.03■□□□□ -0
CPSF1-210ENST00000532935 A8MU76 341 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 NVLO15381 856 aaKnown RBP15.03■□□□□ -0
CPSF1-210ENST00000532935 AP2A2O94973 939 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 POLBP06746 335 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 CCL4P13236 92 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 AMD1P17707 334 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms