RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 UCK1Q9HA47 277 aa13.66□□□□□ -0.22
TSPAN4-220ENST00000532375 SLC40A1Q9NP59 571 aa13.66□□□□□ -0.22
TSPAN4-220ENST00000532375 OGFRQ9NZT2 677 aa13.66□□□□□ -0.22
TSPAN4-220ENST00000532375 PDP2Q9P2J9 529 aa13.66□□□□□ -0.22
TSPAN4-220ENST00000532375 DKK4Q9UBT3 224 aa13.66□□□□□ -0.22
TSPAN4-220ENST00000532375 APC2O95996 2303 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 PMS2P1A4D2B8 440 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 PDZK1P1A8MUH7 402 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 TAF4O00268 1085 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 SEC31AO94979 1220 aaKnown RBP13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 VAPBO95292 243 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 PROS1P07225 676 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 SLC2A4P14672 509 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 VCLP18206 1134 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 PBLDP30039 288 aaPredicted RBP13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 CCKBRP32239 447 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 CSF2RBP32927 897 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 CLPPQ16740 277 aaPredicted RBP13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 FASTKD1Q53R41 847 aaKnown RBP13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 LYPLAL1Q5VWZ2 237 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 TMEM26Q6ZUK4 368 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 PCGF5Q86SE9 256 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 SLC9B2Q86UD5 537 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 GPR150Q8NGU9 434 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 HM13Q8TCT9 377 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 GRAMD1AQ96CP6 724 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 RMDN2Q96LZ7 410 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 NUDT22Q9BRQ3 303 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 WDR83Q9BRX9 315 aaKnown RBP13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 TBC1D10AQ9BXI6 508 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 OR52A5Q9H2C5 316 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 COG4Q9H9E3 785 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 RDH14Q9HBH5 336 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 CATSPERZQ9NTU4 200 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 CDC23Q9UJX2 597 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 ACSL5Q9ULC5 683 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 PSMD13Q9UNM6 376 aa13.65□□□□□ -0.22
TSPAN4-220ENST00000532375 SLC5A10A0PJK1 596 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 LILRA5A6NI73 299 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 GOLGA8KD6RF30 607 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 GOLGA8TH3BQL2 631 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 RAD51CO43502 376 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 BANF1O75531 89 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 CPNE6O95741 557 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 POLBP06746 335 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 PDHA2P29803 388 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 RPL21P46778 160 aaKnown RBP13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 DHX9Q08211 1270 aaKnown RBP13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 C2orf54Q08AI8 447 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 MORF4L2Q15014 288 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 TYSND1Q2T9J0 566 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 AMZ1Q400G9 498 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 CENPUQ71F23 418 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 MDM1Q8TC05 714 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 LKAAEAR1Q8TD35 194 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 SH3KBP1Q96B97 665 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 SLC38A3Q99624 504 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 FOXP3Q9BZS1 431 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 WWP1Q9H0M0 922 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 SEMA6CQ9H3T2 930 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 POT1Q9NUX5 634 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 KCNK4Q9NYG8 393 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 IL1RAPL1Q9NZN1 696 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 TMEM9Q9P0T7 183 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 RPS6KL1Q9Y6S9 549 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 ACACAQ13085 2346 aa13.64□□□□□ -0.23
TSPAN4-220ENST00000532375 IGHV5-10-1A0A0J9YXX1 117 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 USP1O94782 785 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 VIPP01282 170 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 GSTM1P09488 218 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 LSSP48449 732 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 LIMK2P53671 638 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 ITGA8P53708 1063 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 EPHA4P54764 986 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 GPLD1P80108 840 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 GSTM4Q03013 218 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 CYP4F3Q08477 520 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 GPR18Q14330 331 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 ZNF789Q5FWF6 425 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 DUPD1Q68J44 220 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 PIM3Q86V86 326 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 UNC5BQ8IZJ1 945 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 AVL9Q8NBF6 648 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 LPGAT1Q92604 370 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 ZNF669Q96BR6 464 aaPredicted RBP13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 LIN37Q96GY3 246 aaPredicted RBP13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 BIRC8Q96P09 236 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 EBNA1BP2Q99848 306 aaKnown RBP13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 ERP44Q9BS26 406 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 CARD6Q9BX69 1037 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 FAM8A1Q9UBU6 413 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 CDYLQ9Y232 598 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 SNX24Q9Y343 169 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 FAM169AQ9Y6X4 670 aa13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 URB1O60287 2271 aaKnown RBP13.63□□□□□ -0.23
TSPAN4-220ENST00000532375 FAM187AA6NFU0 413 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 IQCF5A8MTL0 148 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 EFCAB8A8MWE9 144 aa13.62□□□□□ -0.23
TSPAN4-220ENST00000532375 BHMG1C9JSJ3 638 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms