RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 FAM153AQ9UHL3 310 aa20.52■□□□□ 0.88
FDFT1-220ENST00000531733 LCMT1Q9UIC8 334 aa20.52■□□□□ 0.88
FDFT1-220ENST00000531733 SHANK1Q9Y566 2161 aa20.52■□□□□ 0.88
FDFT1-220ENST00000531733 OR5K3A6NET4 321 aa20.51■□□□□ 0.87
FDFT1-220ENST00000531733 ARGFXA6NJG6 315 aa20.51■□□□□ 0.87
FDFT1-220ENST00000531733 TTLL8A6PVC2 850 aa20.51■□□□□ 0.87
FDFT1-220ENST00000531733 MTHFD1P11586 935 aaKnown RBP20.51■□□□□ 0.87
FDFT1-220ENST00000531733 ACY1Q03154 408 aa20.51■□□□□ 0.87
FDFT1-220ENST00000531733 PLCL1Q15111 1095 aa20.51■□□□□ 0.87
FDFT1-220ENST00000531733 C4orf17Q53FE4 359 aa20.51■□□□□ 0.87
FDFT1-220ENST00000531733 DNTTIP2Q5QJE6 756 aaKnown RBP20.51■□□□□ 0.87
FDFT1-220ENST00000531733 DET1Q7L5Y6 550 aa20.51■□□□□ 0.87
FDFT1-220ENST00000531733 SPDYE1Q8NFV5 336 aaPredicted RBP20.51■□□□□ 0.87
FDFT1-220ENST00000531733 CPT1CQ8TCG5 803 aa20.51■□□□□ 0.87
FDFT1-220ENST00000531733 BLOC1S5Q8TDH9 187 aa20.51■□□□□ 0.87
FDFT1-220ENST00000531733 FCRL4Q96PJ5 515 aa20.51■□□□□ 0.87
FDFT1-220ENST00000531733 GPR87Q9BY21 358 aa20.51■□□□□ 0.87
FDFT1-220ENST00000531733 WWP1Q9H0M0 922 aa20.51■□□□□ 0.87
FDFT1-220ENST00000531733 LRRC4CQ9HCJ2 640 aa20.51■□□□□ 0.87
FDFT1-220ENST00000531733 MLXIPLQ9NP71 852 aa20.51■□□□□ 0.87
FDFT1-220ENST00000531733 SPTLC3Q9NUV7 552 aa20.51■□□□□ 0.87
FDFT1-220ENST00000531733 HRASLS2Q9NWW9 162 aa20.51■□□□□ 0.87
FDFT1-220ENST00000531733 SPTBP11277 2137 aa20.5■□□□□ 0.87
FDFT1-220ENST00000531733 PCSK5Q92824 1860 aa20.5■□□□□ 0.87
FDFT1-220ENST00000531733 UNC79Q9P2D8 2635 aa20.5■□□□□ 0.87
FDFT1-220ENST00000531733 GLYATL1P3A0A0U1RQE8 302 aa20.5■□□□□ 0.87
FDFT1-220ENST00000531733 TLCD2A6NGC4 264 aa20.5■□□□□ 0.87
FDFT1-220ENST00000531733 KCNJ13O60928 360 aa20.5■□□□□ 0.87
FDFT1-220ENST00000531733 ZFXP17010 805 aaPredicted RBP20.5■□□□□ 0.87
FDFT1-220ENST00000531733 CCL11P51671 97 aa20.5■□□□□ 0.87
FDFT1-220ENST00000531733 HSD11B2P80365 405 aa20.5■□□□□ 0.87
FDFT1-220ENST00000531733 PPP2R5EQ16537 467 aa20.5■□□□□ 0.87
FDFT1-220ENST00000531733 METRNLQ641Q3 311 aa20.5■□□□□ 0.87
FDFT1-220ENST00000531733 RHOT1Q8IXI2 618 aa20.5■□□□□ 0.87
FDFT1-220ENST00000531733 DTX3LQ8TDB6 740 aa20.5■□□□□ 0.87
FDFT1-220ENST00000531733 ZNF501Q96CX3 271 aaPredicted RBP20.5■□□□□ 0.87
FDFT1-220ENST00000531733 SRPK1Q96SB4 655 aaKnown RBP20.5■□□□□ 0.87
FDFT1-220ENST00000531733 CHP1Q99653 195 aa20.5■□□□□ 0.87
FDFT1-220ENST00000531733 NRTNQ99748 197 aa20.5■□□□□ 0.87
FDFT1-220ENST00000531733 XPO4Q9C0E2 1151 aaKnown RBP20.5■□□□□ 0.87
FDFT1-220ENST00000531733 FARSAQ9Y285 508 aaKnown RBP20.5■□□□□ 0.87
FDFT1-220ENST00000531733 UBA6A0AVT1 1052 aaPredicted RBP20.49■□□□□ 0.87
FDFT1-220ENST00000531733 OR6C74A6NCV1 312 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 SCRG1O75711 98 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 CDKN2BP42772 138 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 PTGIRP43119 386 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 PGDP52209 483 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 KPNA2P52292 529 aaKnown RBP20.49■□□□□ 0.87
FDFT1-220ENST00000531733 TPM4P67936 248 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 TUBB4BP68371 445 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 TUBB2AQ13885 445 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 SLC1A5Q15758 541 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 PRR30Q53SZ7 412 aaPredicted RBP20.49■□□□□ 0.87
FDFT1-220ENST00000531733 LDLRAP1Q5SW96 308 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 FNBP1LQ5T0N5 605 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 LRRC38Q5VT99 294 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 CYB5D1Q6P9G0 228 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 ZNF517Q6ZMY9 492 aaPredicted RBP20.49■□□□□ 0.87
FDFT1-220ENST00000531733 GLT6D1Q7Z4J2 308 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 SYVN1Q86TM6 617 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 KMT5CQ86Y97 462 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 ZNF567Q8N184 647 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 LILRA3Q8N6C8 439 aaPredicted RBP20.49■□□□□ 0.87
FDFT1-220ENST00000531733 TFB1MQ8WVM0 346 aaKnown RBP20.49■□□□□ 0.87
FDFT1-220ENST00000531733 THAP4Q8WY91 577 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 MR1Q95460 341 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 DNAJC7Q99615 494 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 SLC25A23Q9BV35 468 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 TUBB2BQ9BVA1 445 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 ING2Q9H160 280 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 CHST8Q9H2A9 424 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 TRABDQ9H4I3 376 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 FAM8A1Q9UBU6 413 aa20.49■□□□□ 0.87
FDFT1-220ENST00000531733 RP1L1Q8IWN7 2480 aaPredicted RBP20.48■□□□□ 0.87
FDFT1-220ENST00000531733 CST8O60676 142 aa20.48■□□□□ 0.87
FDFT1-220ENST00000531733 CPNE3O75131 537 aaKnown RBP20.48■□□□□ 0.87
FDFT1-220ENST00000531733 SEMA7AO75326 666 aa20.48■□□□□ 0.87
FDFT1-220ENST00000531733 VPS4BO75351 444 aa20.48■□□□□ 0.87
FDFT1-220ENST00000531733 SORBS2O94875 1100 aaKnown RBP20.48■□□□□ 0.87
FDFT1-220ENST00000531733 LCA5LO95447 670 aa20.48■□□□□ 0.87
FDFT1-220ENST00000531733 ARHGAP25P42331 645 aa20.48■□□□□ 0.87
FDFT1-220ENST00000531733 ARL4DP49703 201 aa20.48■□□□□ 0.87
FDFT1-220ENST00000531733 RPS15P62841 145 aaKnown RBP20.48■□□□□ 0.87
FDFT1-220ENST00000531733 ABRQ12979 859 aa20.48■□□□□ 0.87
FDFT1-220ENST00000531733 XRCC4Q13426 336 aa20.48■□□□□ 0.87
FDFT1-220ENST00000531733 TAZQ16635 292 aa20.48■□□□□ 0.87
FDFT1-220ENST00000531733 KAZNQ674X7 775 aa20.48■□□□□ 0.87
FDFT1-220ENST00000531733 KLHL35Q6PF15 583 aa20.48■□□□□ 0.87
FDFT1-220ENST00000531733 MICALCLQ6ZW33 695 aa20.48■□□□□ 0.87
FDFT1-220ENST00000531733 BPHLQ86WA6 291 aaPredicted RBP20.48■□□□□ 0.87
FDFT1-220ENST00000531733 TMEM126BQ8IUX1 230 aa20.48■□□□□ 0.87
FDFT1-220ENST00000531733 GALNT11Q8NCW6 608 aa20.48■□□□□ 0.87
FDFT1-220ENST00000531733 IPMKQ8NFU5 416 aa20.48■□□□□ 0.87
FDFT1-220ENST00000531733 ADAMTS17Q8TE56 1095 aa20.48■□□□□ 0.87
FDFT1-220ENST00000531733 C12orf66Q96MD2 445 aa20.48■□□□□ 0.87
FDFT1-220ENST00000531733 CD180Q99467 661 aa20.48■□□□□ 0.87
FDFT1-220ENST00000531733 ZCCHC2Q9C0B9 1178 aaKnown RBP20.48■□□□□ 0.87
FDFT1-220ENST00000531733 DEF6Q9H4E7 631 aa20.48■□□□□ 0.87
FDFT1-220ENST00000531733 KCND1Q9NSA2 647 aa20.48■□□□□ 0.87
FDFT1-220ENST00000531733 LUZP4Q9P127 313 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms