RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 SMC6Q96SB8 1091 aa18.72■□□□□ 0.59
SMPD1-205ENST00000531303 RMI1Q9H9A7 625 aa18.72■□□□□ 0.59
SMPD1-205ENST00000531303 ACOT9Q9Y305 439 aa18.72■□□□□ 0.59
SMPD1-205ENST00000531303 TP53BP1Q12888 1972 aaPredicted RBP18.72■□□□□ 0.59
SMPD1-205ENST00000531303 H3BQF6 201 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 TNFRSF10CO14798 259 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 TOP3BO95985 862 aaKnown RBP18.71■□□□□ 0.59
SMPD1-205ENST00000531303 CCDC166P0CW27 439 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 GNSP15586 552 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 AOAHP28039 575 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 PREPP48147 710 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 NUBP1P53384 320 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 EIF2B5Q13144 721 aaKnown RBP18.71■□□□□ 0.59
SMPD1-205ENST00000531303 CSHL1Q14406 222 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 SYTL3Q4VX76 610 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 ACSBG2Q5FVE4 666 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 C11orf96Q7Z7L8 435 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 TBC1D1Q86TI0 1168 aaPredicted RBP18.71■□□□□ 0.59
SMPD1-205ENST00000531303 IQCHQ86VS3 1027 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 AMZ2Q86W34 360 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 SPATS2Q86XZ4 545 aaKnown RBP18.71■□□□□ 0.59
SMPD1-205ENST00000531303 DCP2Q8IU60 420 aaKnown RBP18.71■□□□□ 0.59
SMPD1-205ENST00000531303 KCTD4Q8WVF5 259 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 ANKRD49Q8WVL7 239 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 DNAJC28Q9NX36 388 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 PILRBQ9UKJ0 227 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 ANKRD12Q6UB98 2062 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 LRP4O75096 1905 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 FANCMQ8IYD8 2048 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 A0A087X1B8 175 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 A0A1B0GTW7 788 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 A0A1B0GVT2 93 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 VILLO15195 856 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 TNFP01375 233 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 APOA4P06727 396 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 HPDP32754 393 aaPredicted RBP18.71■□□□□ 0.59
SMPD1-205ENST00000531303 ARHGAP8P85298 464 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 OVGP1Q12889 678 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 NFE2L1Q14494 772 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 TEAD4Q15561 434 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 PRAMEF14Q5SWL7 426 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 PLD6Q8N2A8 252 aaKnown RBP18.71■□□□□ 0.59
SMPD1-205ENST00000531303 ACMSDQ8TDX5 336 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 EEF1AKMT1Q8WVE0 214 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 LINGO1Q96FE5 620 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 SCARF2Q96GP6 870 aaPredicted RBP18.71■□□□□ 0.59
SMPD1-205ENST00000531303 OR2M4Q96R27 311 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 TCEAL2Q9H3H9 227 aaPredicted RBP18.71■□□□□ 0.59
SMPD1-205ENST00000531303 OSGEPL1Q9H4B0 414 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 POPDC3Q9HBV1 291 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 SYTL2Q9HCH5 934 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 KCNK9Q9NPC2 374 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 GPR27Q9NS67 375 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 KLC4Q9NSK0 619 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 ZNF358Q9NW07 568 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 KLF15Q9UIH9 416 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 RUVBL2Q9Y230 463 aaKnown RBP18.71■□□□□ 0.59
SMPD1-205ENST00000531303 KCNK6Q9Y257 313 aa18.71■□□□□ 0.59
SMPD1-205ENST00000531303 ZFC3H1O60293 1989 aaKnown RBP18.71■□□□□ 0.58
SMPD1-205ENST00000531303 MGAT4DA6NG13 374 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 HMGB1P1B2RPK0 211 aaPredicted RBP18.7■□□□□ 0.58
SMPD1-205ENST00000531303 COPEO14579 308 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 BRAFP15056 766 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 ZNF37AP17032 561 aaPredicted RBP18.7■□□□□ 0.58
SMPD1-205ENST00000531303 CD9P21926 228 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 CSRP3P50461 194 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 NXPH1P58417 271 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 IL2P60568 153 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 DLG1Q12959 904 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 TTLL9Q3SXZ7 439 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 FAM83HQ6ZRV2 1179 aaPredicted RBP18.7■□□□□ 0.58
SMPD1-205ENST00000531303 SH2D5Q6ZV89 423 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 PARGQ86W56 976 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 SYT12Q8IV01 421 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 VRK3Q8IV63 474 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 CNPY4Q8N129 248 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 OR2L2Q8NH16 312 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 SKA2Q8WVK7 121 aaPredicted RBP18.7■□□□□ 0.58
SMPD1-205ENST00000531303 ASZ1Q8WWH4 475 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 SKA1Q96BD8 255 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 NXNL1Q96CM4 212 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 CABS1Q96KC9 395 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 TMEM168Q9H0V1 697 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 MED4Q9NPJ6 270 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 SENP1Q9P0U3 644 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 GULP1Q9UBP9 304 aa18.7■□□□□ 0.58
SMPD1-205ENST00000531303 KPNA5O15131 536 aa18.69■□□□□ 0.58
SMPD1-205ENST00000531303 DGKAP23743 735 aa18.69■□□□□ 0.58
SMPD1-205ENST00000531303 CCNFP41002 786 aa18.69■□□□□ 0.58
SMPD1-205ENST00000531303 GLRBP48167 497 aa18.69■□□□□ 0.58
SMPD1-205ENST00000531303 HK3P52790 923 aa18.69■□□□□ 0.58
SMPD1-205ENST00000531303 SLC18A2Q05940 514 aa18.69■□□□□ 0.58
SMPD1-205ENST00000531303 PIWIL4Q7Z3Z4 852 aaKnown RBP18.69■□□□□ 0.58
SMPD1-205ENST00000531303 CENPLQ8N0S6 344 aaPredicted RBP18.69■□□□□ 0.58
SMPD1-205ENST00000531303 HM13Q8TCT9 377 aa18.69■□□□□ 0.58
SMPD1-205ENST00000531303 TMEM159Q96B96 161 aa18.69■□□□□ 0.58
SMPD1-205ENST00000531303 LINC00615Q96LM1 132 aaPredicted RBP18.69■□□□□ 0.58
SMPD1-205ENST00000531303 TSNARE1Q96NA8 513 aa18.69■□□□□ 0.58
SMPD1-205ENST00000531303 SELENOSQ9BQE4 189 aa18.69■□□□□ 0.58
SMPD1-205ENST00000531303 C12orf65Q9H3J6 166 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms