RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 DDX53Q86TM3 631 aaKnown RBP11.42□□□□□ -0.58
USP35-207ENST00000530546 BBS7Q8IWZ6 715 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 TCEAL8Q8IYN2 117 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 SLC7A5P1Q8MH63 180 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 PCDH20Q8N6Y1 951 aaKnown RBP11.42□□□□□ -0.58
USP35-207ENST00000530546 MAELQ96JY0 434 aaKnown RBP11.42□□□□□ -0.58
USP35-207ENST00000530546 MROQ9BYG7 248 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 NDEL1Q9GZM8 345 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 TNKS2Q9H2K2 1166 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 SEMA4BQ9NPR2 832 aaPredicted RBP11.42□□□□□ -0.58
USP35-207ENST00000530546 MRPL40Q9NQ50 206 aaKnown RBP11.42□□□□□ -0.58
USP35-207ENST00000530546 KLHL3Q9UH77 587 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 ERVK-11Q9UQG0 969 aa11.42□□□□□ -0.58
USP35-207ENST00000530546 ZBBXA8MT70 800 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 HTRA2O43464 458 aaPredicted RBP11.41□□□□□ -0.58
USP35-207ENST00000530546 CNPP09543 421 aaKnown RBP11.41□□□□□ -0.58
USP35-207ENST00000530546 MTHFD2P13995 350 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 PKMP14618 531 aaKnown RBP11.41□□□□□ -0.58
USP35-207ENST00000530546 ITGB6P18564 788 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 EEF1DP29692 281 aaKnown RBP11.41□□□□□ -0.58
USP35-207ENST00000530546 CCT8P50990 548 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 FOXA1P55317 472 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 WDR5P61964 334 aaKnown RBP11.41□□□□□ -0.58
USP35-207ENST00000530546 KCNJ8Q15842 424 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 LAYNQ6UX15 382 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 GAREM2Q75VX8 874 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 DDIASQ8IXT1 998 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 FBXO39Q8N4B4 442 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 MRPS31Q92665 395 aaKnown RBP11.41□□□□□ -0.58
USP35-207ENST00000530546 FAR2Q96K12 515 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 C3orf30Q96M34 536 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 RETREG1Q9H6L5 497 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 WDR41Q9HAD4 459 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 SYTL2Q9HCH5 934 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 RIMKLBQ9ULI2 386 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 NOX1Q9Y5S8 564 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 ABHD14A-ACY1A0A1B0GW23 586 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 A0A1W2PRU2 124 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 TGM5O43548 720 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 GREM1O60565 184 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 ECI2O75521 394 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 PPP3CCP48454 512 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 SUOXP51687 545 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 GRSF1Q12849 480 aaKnown RBP eCLIP11.41□□□□□ -0.58
USP35-207ENST00000530546 BNIP3Q12983 259 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 HERC3Q15034 1050 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 NHSL2Q5HYW2 709 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 FGD3Q5JSP0 725 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 ITIH5Q86UX2 942 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 CPNE9Q8IYJ1 553 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 TTC30BQ8N4P2 665 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 SLC15A4Q8N697 577 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 FAM47BQ8NA70 645 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 OR9I1Q8NGQ6 314 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 TFAP2CQ92754 450 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 L3HYPDHQ96EM0 354 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 RPL10LQ96L21 214 aaKnown RBP11.41□□□□□ -0.58
USP35-207ENST00000530546 ATOH8Q96SQ7 321 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 TUBA1CQ9BQE3 449 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 BEGAINQ9BUH8 593 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 MEAF6Q9HAF1 191 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 TRMT6Q9UJA5 497 aaKnown RBP11.41□□□□□ -0.58
USP35-207ENST00000530546 LSM7Q9UK45 103 aaKnown RBP11.41□□□□□ -0.58
USP35-207ENST00000530546 BTRCQ9Y297 605 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 OR51B4Q9Y5P0 310 aa11.41□□□□□ -0.58
USP35-207ENST00000530546 E5RI56 91 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 VPS26AO75436 327 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 CDK14O94921 469 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 LRG1P02750 347 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 HOXB8P17481 243 aaPredicted RBP11.4□□□□□ -0.58
USP35-207ENST00000530546 CES1P23141 567 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 ECT2LQ008S8 904 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 ITGADQ13349 1161 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 FASTKQ14296 549 aaKnown RBP11.4□□□□□ -0.58
USP35-207ENST00000530546 ARMC12Q5T9G4 340 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 IRAK1BP1Q5VVH5 260 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 TTC33Q6PID6 262 aaPredicted RBP11.4□□□□□ -0.58
USP35-207ENST00000530546 FAM151BQ6UXP7 276 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 MYO1HQ8N1T3 1032 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 FAM156AQ8NDB6 213 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 STAG3L4Q8TBR4 150 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 ASB9Q96DX5 294 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 LINGO1Q96FE5 620 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 MYO19Q96H55 970 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 PAWRQ96IZ0 340 aaKnown RBP11.4□□□□□ -0.58
USP35-207ENST00000530546 UHRF1Q96T88 793 aaPredicted RBP11.4□□□□□ -0.58
USP35-207ENST00000530546 TFB2MQ9H5Q4 396 aaKnown RBP11.4□□□□□ -0.58
USP35-207ENST00000530546 EFCAB1Q9HAE3 211 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 DKK3Q9UBP4 350 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 PKP3Q9Y446 797 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 TANC1Q9C0D5 1861 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 A0A1B0GTL3 188 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 CRCPO75575 148 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 NELFEP18615 380 aaKnown RBP11.4□□□□□ -0.58
USP35-207ENST00000530546 DPP6P42658 865 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 AGTR2P50052 363 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 LRRC26Q2I0M4 334 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 CTSL3PQ5NE16 218 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 PELI3Q8N2H9 469 aa11.4□□□□□ -0.58
USP35-207ENST00000530546 PACRGLQ8N7B6 248 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms